FMO09713.5prime Sequence
884 bp (884 high quality bases) assembled on 2010-10-20
> FMO09713.5prime
CAGTCGACATGAAGTACCTCAAAGACTGCAGTTTCCATGTCCTGTTGGTT
CTGCTGCTAATGATCCGTGGATCGCTTTGTGTGCCAGCTTTGGACGCAGC
TCCTCCGGCTGCCACACCCAACACCGTGGAAGAGTCGGAAAATCTGGTCG
AGGGCAGTGGCGAACCAGTTGTCGCACCCACAGACGTGGTACCTGCAGCC
AGCAATGGTACCACTCCTCCGGCTGAAGGAAACTCGGAAGCAGCGGTGCC
AGACAACGTGGCCAGTGGTAGCAGCATTGATCCCACCACCATTTACGCTG
GAGGCCTACTCACTCCCGAGGCCTTTCAGCAGTACCTGAGTCAGTATGGA
GCGTATGCTCCTTACTCCTATCCTGCTCCTGTTGCGGGAACAGCAGCTGG
CATTTACCCGTACCCTGGACCCATTGTGGTGCAGACGGGCTACGAGGGAT
TCCTGGTGCCCACTAATACCGCAGGACAATCGGACAGCACCACTGTCCTG
GCTCCCACTGCCCAGCCCAACTCCTCGAATCCACTGATGACATTTGTCTC
CAATCTTCTGCCCACGATCCTGATGTCCACGCTCTTTCGCATCGCTGCCG
TTGTGGTTTCCGCCGTGGGCATCATCCTCTTTGGCGGTGCCATCACCAGT
GCCCTGTGCAGGATCACTCCAATCTGTGAAATACCCGCCCGTGCTGTGAA
TATCCTGCGGACGGGTGGTGCCCAGGATGTGGGTCGCATGCTGGCCGAGG
AGATGACTCCGGAACGAGTGCGTCGGGCAACGGAATTCGTGCGCAACGCC
ATCCGGAAGTACAAGCAACTGCAGAAGCTGGTGGAGGCATCGGAGGCGGT
GACCGAGTTGACCAACGCAAGCTTTCTAGACCAT
FMO09713.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10035-RB | 1754 | CG10035-RB | 32..889 | 9..866 | 4290 | 100 | Plus |
| CG10035-RA | 972 | CG10035-RA | 32..889 | 9..866 | 4290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12381734..12382352 | 866..248 | 3095 | 100 | Minus |
| 3R | 32079331 | 3R | 12382421..12382660 | 248..9 | 1200 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 14:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 8133..8200 | 863..797 | 112 | 64.7 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9577..9644 | 863..797 | 112 | 64.7 | Minus |
FMO09713.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:23 Download gff for
FMO09713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 22..888 | 1..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:45:09 Download gff for
FMO09713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 22..888 | 1..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:06 Download gff for
FMO09713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 23..889 | 1..866 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:06 Download gff for
FMO09713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12381734..12382351 | 249..866 | 100 | <- | Minus |
| 3R | 12382421..12382667 | 1..248 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:45:09 Download gff for
FMO09713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8208143..8208389 | 1..248 | 98 | | Minus |
| arm_3R | 8207456..8208073 | 249..866 | 100 | <- | Minus |
