FMO09714.5prime Sequence
491 bp (491 high quality bases) assembled on 2010-10-20
> FMO09714.5prime
CAGTCGACATGTCTGTGCCTTTCAGTGGCGCATTGCGGCGTTCCGGCGGC
ATTGTGTCCGCCATTGGCAAGCAGCTGAAGAGCGTGAATTTGAAGGGCGT
CAAGCGGATAACCGTGCAGTTCGATCCATTCGCGGAAAATGTCAAGTCCA
CACGGGAATTCCTCTTCCTGCTCTCCACACCCAAAGTGGCAGCTACGAAT
CCCAAGTGCGTGGTCAAGCCAGAAATCGTCTGCGATCGCCAGCCGGCCAA
CATCAAGTTTGCCCTGATTGATTCAGCGCAAGAACAAGCCCAAGTCAAGG
AGATCCGCTTCAACAGCGATAACCTAAACACACTAGAGCTGCTGCAGCTG
TGCAACAAGCACGTGTCCAGCTTGGCACCGCGCGAGGAGATCACCAACAA
GGTCCTGACCAAGGCGGAGAAACAGAAACTAGCAGGAGGCGCCGGCGGCG
GAAAGAAGGCAACCAAGAAGAAGGCAAGCTTTCTAGACCAT
FMO09714.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:52:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33155-RC | 829 | CG33155-RC | 106..570 | 9..473 | 2325 | 100 | Plus |
| mRpL53-RA | 829 | CG30481-RA | 106..570 | 9..473 | 2325 | 100 | Plus |
| CG33155-RA | 725 | CG33155-RA | 147..466 | 154..473 | 1600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:52:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13955213..13955405 | 281..473 | 965 | 100 | Plus |
| 2R | 25286936 | 2R | 13954300..13954446 | 9..155 | 735 | 100 | Plus |
| 2R | 25286936 | 2R | 13954916..13955044 | 154..282 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:52:23 has no hits.
FMO09714.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:37 Download gff for
FMO09714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33155-RC | 102..569 | 9..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:45:50 Download gff for
FMO09714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL53-RA | 106..573 | 9..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:49 Download gff for
FMO09714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL53-RA | 106..573 | 9..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:49 Download gff for
FMO09714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13954300..13954445 | 9..154 | 100 | -> | Plus |
| 2R | 13954917..13955044 | 155..282 | 100 | -> | Plus |
| 2R | 13955215..13955408 | 283..477 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:45:50 Download gff for
FMO09714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9841805..9841950 | 9..154 | 100 | -> | Plus |
| arm_2R | 9842422..9842549 | 155..282 | 100 | -> | Plus |
| arm_2R | 9842720..9842913 | 283..477 | 98 | | Plus |
