FMO09719.5prime Sequence
707 bp (707 high quality bases) assembled on 2010-10-20
> FMO09719.5prime
CAGTCGACATGTATTCAAAGGCGGGATTTGTTCTAATTTTCGTGCTGGGT
CTAGTGTCCAGCAGCTGGGGATTCCTGGAGCATGACAGCTGGATTACAGT
GGAGCTCCAGCACTCGCTGGCTGCAAACTCGGAAAGTTTCTCCTTCCGCG
GGAATGTGACGATTCCCAGTCTCAACTCTGGTCTGGCCAATGTGGAGCAA
CCAGATCTGAGCACTGCCGATCTGGACTTGCTGAAGAAACTGGCCCTTGG
AAACGAGTTCTACCGTTTGAAGGCCACGGTGGTGTATTCAAATGGAGCTA
AGGCGCAGTTCATCACTTCCAACAAGGCCTGTCGCCTGCTGCAAGCCCAA
TTGAATGACGTGCTTTGGGTGTCGCTCGAACCCTCCGGATACGTAACCGG
CATCACTGTGTCCCAGGACACGGCCCCGGCCACTATAGAGTGCACCCAGG
AAGACGTGAATAAGCTACTGGAAACGCAATTCAGCACCGATGTCCTCATC
CGCCACGCTGAACTGGCCCCCGTGCCCGATACTGCTGGCTTTATTCAGAA
GGTGGAGCGGGAGCGCGAGGCCAGGGAGCGCGGGGAGGTTCGGGATAACC
GCGGCTTCTTTGCCAAATACTGGATGTACATCGTTCCGGTAGTTCTGTTG
GTCTTCATTTCGGGAGCCACCAACCAGGACGGTGCAAAAGCAAGCTTTCT
AGACCAT
FMO09719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:52:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32441-RC | 887 | CG32441-RC | 71..751 | 9..689 | 3405 | 100 | Plus |
| CG32441-RD | 902 | CG32441-RD | 145..766 | 68..689 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:52:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21575225..21575610 | 235..620 | 1930 | 100 | Plus |
| 3L | 28110227 | 3L | 21574743..21574911 | 68..236 | 845 | 100 | Plus |
| 3L | 28110227 | 3L | 21575670..21575738 | 621..689 | 345 | 100 | Plus |
| 3L | 28110227 | 3L | 21574627..21574687 | 9..69 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:52:41 has no hits.
FMO09719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:40 Download gff for
FMO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32441-RC | 69..755 | 9..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:45:58 Download gff for
FMO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32441-RC | 71..757 | 9..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:59 Download gff for
FMO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32441-RC | 71..757 | 9..697 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:59 Download gff for
FMO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21574627..21574686 | 9..68 | 100 | -> | Plus |
| 3L | 21574744..21574911 | 69..236 | 100 | -> | Plus |
| 3L | 21575227..21575610 | 237..620 | 100 | -> | Plus |
| 3L | 21575670..21575744 | 621..697 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:45:58 Download gff for
FMO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21567727..21567786 | 9..68 | 100 | -> | Plus |
| arm_3L | 21567844..21568011 | 69..236 | 100 | -> | Plus |
| arm_3L | 21568327..21568710 | 237..620 | 100 | -> | Plus |
| arm_3L | 21568770..21568844 | 621..697 | 94 | | Plus |
