Clone FMO09720 Report

Search the DGRC for FMO09720

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:97
Well:20
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11760-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09720.5prime Sequence

473 bp (473 high quality bases) assembled on 2010-10-20

> FMO09720.5prime
CAGTCGACATGCCGCCCAAGCGTCCGCCACCGCTCGTGCCGAAGAAGCCA
AATCCCAGCATGAACTACGAGGTGTTGATCTACCTCAACTCGTTCTACTT
TGGCATGTTCGCCTGTTGCGAGATGGCCATGGGCCTCCTGAAGGCCATCA
ATCTCAGCTACACGGGACATACTCTAGCCCTGGACACGGGGGTGATGATT
AGCTTCATTGTCTTTGAGACGATCCGATTGATAATGGGGCGCATGAGTTC
GCTGGCCGATCGAGGCTGGTCGGCCATACTGTCGGTCTTCATGACCGCCC
CCTGCTTTGTGGGCGTCTCCTATCTACTGCTGCTCCAGACCTACCGACTG
CGCCTGGAGTACTGCCTGTGCACGCTGCAGATCGCCCTTTACCTGACCGA
GGTGTGGTATGCCATCGTCTTCGTTTTCTCGCTGTGTCGTCCAGTAACTT
ATGATGCAAGCTTTCTAGACCAT

FMO09720.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:52:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG11760-RB 1908 CG11760-RB 136..582 9..455 2235 100 Plus
CG8116-RC 1826 CG8116-RC 1289..1481 263..455 965 100 Plus
CG8116-RB 2812 CG8116-RB 1294..1486 263..455 965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8719333..8719589 9..265 1285 100 Plus
3R 32079331 3R 8719802..8719994 263..455 965 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:52:45 has no hits.

FMO09720.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:40 Download gff for FMO09720.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11760-RB 129..586 1..461 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:00 Download gff for FMO09720.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11760-RB 129..586 1..461 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:01 Download gff for FMO09720.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11760-RB 129..586 1..461 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:01 Download gff for FMO09720.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8719326..8719588 1..264 98 -> Plus
3R 8719804..8719998 265..461 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:00 Download gff for FMO09720.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4545048..4545310 1..264 98 -> Plus
arm_3R 4545526..4545720 265..461 98   Plus