FMO09725.5prime Sequence
1144 bp (1037 high quality bases) assembled on 2010-10-20
> FMO09725.5prime
CAGTCGACATGGATCGTCTGCGTCGCTCCTTTCGCGATTCCTTTAGGCGT
CGCAAGGATCGCGTTCCCGAATCCTCGAAGCCGCATCAATGGCAGGCGGA
CGAGGAGGCCGTGCGATCGGCCACCTGCTCCTTTTCCGTCAAGTATCTGG
GATGTGTCGAGGTCTTTGAATCGCGCGGCATGCAGGTCTGCGAGGAGGCA
CTCAAGGTCTTGAGGCAATCCCGTCGTCGTCCTGTCCGCGGATTACTTCA
TGTCAGCGGAGACGGCCTGCGAGTGGTGGACGACGAGACCAAGGGCCTGA
TAGTGGACCAGACCATCGAGAAGGTCAGCTTCTGTGCACCGGATCGCAAT
CACGAACGCGGCTTCAGCTACATATGCCGGGATGGAACCACTCGTCGCTG
GATGTGTCACGGCTTCCTGGCGTGCAAGGACTCCGGCGAGCGATTGTCCC
ATGCCGTTGGCTGTGCTTTTGCCGTTTGTCTGGAGCGAAAGCAGCGACGC
GACAAGGAGTGCGGCGTGACAATGACCTTCGACACGAAGAACTCGACCTT
CACGCGGACCGGATCCTTCCGTCAGCAGACGTTGACGGAGCGTCTGGCAA
TGGCCACAGTGGGCACAAATGAGCGGAGCGTAGATGGGCCGGGATCAGCA
ATGCCGGGTCCTCCGGCGGCCACCGTCAAGCCTTTCAATCCCTTCGCCAT
CGAACGGCCCCATGCCACGCCCAACATGCTGGAGCGTCAGAGTTCGTTCC
GTTTGAGCACGATTGGCAGTCAGTCGCCGTTCAAGCGCCAGATGTCACTG
CGCATCAACGATCTTCCGTCCAATGCCGATCGTCAGAGGGCCTTCCTGAC
CGCCGCCGCTGGCAATCCAATGCAGACGCCACTGCGAAGTGTTTCTCCAT
TGCCGAGGTCTCGCCGGCCAAGTCTGCTGGAGCGGATCCGTTGTCAGCTG
CCGCTGTAGCCGTGATTCTGTGAGCCAACTGTGTCAGGAGCTCAGCCAGG
GTCTCCTCGCTCCTTGACCCAGAACAGACGCCCTATTAGCCGCGGCGAGG
ATCTAAACTTTCACAACATCGCAGCATTATCAGAACATACATTGCCGCCG
AAAAAGCAAGGTGCAACTATGTTAACCTCTATATGCCCGGCCGC
FMO09725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:52:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 942..2072 | 9..1143 | 5245 | 98.2 | Plus |
| numb-RB | 2956 | CG3779-RB | 564..1694 | 9..1143 | 5245 | 98.2 | Plus |
| numb-RA | 3309 | CG3779-RA | 917..2047 | 9..1143 | 5245 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9461824 | 215..1101 | 3965 | 98.7 | Plus |
| 2L | 23513712 | 2L | 9460547..9460753 | 9..215 | 1035 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:52:52 has no hits.
FMO09725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:41 Download gff for
FMO09725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RB | 515..1631 | 2..1122 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:04 Download gff for
FMO09725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 912..2028 | 2..1122 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:04 Download gff for
FMO09725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 912..2028 | 2..1122 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:04 Download gff for
FMO09725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460542..9460753 | 2..215 | 98 | -> | Plus |
| 2L | 9460938..9461842 | 216..1122 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:04 Download gff for
FMO09725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460542..9460753 | 2..215 | 98 | -> | Plus |
| arm_2L | 9460938..9461842 | 216..1122 | 98 | | Plus |
