FMO09729.5prime Sequence
1144 bp (1043 high quality bases) assembled on 2010-10-20
> FMO09729.5prime
CAGTCGACATGCATCGTCGTTGTATAATCTGTGGCCAGGAGCCGGGCGAG
CAGTGCGTCTACCCGCGCAACATGTCGGAGGCTCGCCGGTGGCAGAACTT
GGCCAACCTCAGCAGTTTTGACGTCGACCCCGAATCGCTATGCCGGCACG
GATGCGTTTGCGCCTCCCATTTGGATGGCCACGGATCAGGTTCGGAATCG
GAGAGCTCGTCTCGTGCTGCTGGCAGGGCAAGGACTCAAGCTGGCCTGCA
GGAATGGAGCAGGTGGAGCTCTTCGGCATCGGACGCTGGCCATGGCTATT
CCATCAGCAAAAAGACTAACGAGCGGATCCAGAACCAAAGCAAACAGAGT
CTCGGCTCGGAGAGGCAGGAATTCAGCAGCGCGAACAGATGTACGAATGG
TTGCTGTCGTTTTCGAAACACCTGCAACAGCATGTTCCAGGGCAATACAT
ACACCCAAATGGGACAGAAGTATCCCAATCCACAAACAAGGGCCACAAAC
TTAGAGAACAAAAATAATCCACCTATGAAATTAAGCCCAAGGGTAAATAA
ACCGACCTTTGGAGCTGTAAACTGCACCTGTGATGGATGCACCTGTAGTT
TCTGTCCAGTGCAAGGGATCAAAAAAGCGGTAGCCCCTCTAGAAGAGGAT
TCAGGCAGCCAACAAAGTATAAATAAAGAGTATAAAGAAAGAAAGGATAA
TTCCAAAGGCAGCCCAAAAAAACAGAGTTCCTGTGAACGTCTCACTTGTC
CAGCTTTCACGACAACGGACATAAAAACTGTAGCAGATGATTTCCGCAGT
AGCCCGAACTACCCGGTATCGCCAACTTCACGAGGTAACAACAAAATTAA
AAGTTCGATGAACCAGCAGAATACGAAGAAAAAGCCGGAGCTGAAGAGCG
AATGCTGCCAGACGTGCATCACCCAGCAATTGAAAGGATCAGGAAGTGCA
GTGCTCAACGGTGACGCTGCAGACTCAGAGCTCTTCGCCTGTTAGGCGAA
CCAGATGACCGGCTCGTTCAGCATCAACTGGTAGCCTCAGCGACAGTTAA
TCTGGCGGAATACACCAATAATCGAATACTTAACTTGTGGCGGCGGCCGG
AAAAGAACTCAAATGCCATTCAACGTGCCTGCTATGACCGGAAC
FMO09729.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:53:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14864-RA | 1746 | CG14864-RA | 58..1193 | 9..1141 | 5245 | 98.1 | Plus |
| CG14864-RB | 1727 | CG14864-RB | 67..1174 | 37..1141 | 5105 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15267250..15268372 | 1128..9 | 5005 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:53:07 has no hits.
FMO09729.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:44 Download gff for
FMO09729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14864-RA | 58..1172 | 9..1119 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:11 Download gff for
FMO09729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14864-RA | 58..1172 | 9..1119 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:09 Download gff for
FMO09729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14864-RA | 58..1172 | 9..1119 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:09 Download gff for
FMO09729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15267234..15268372 | 9..1144 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:11 Download gff for
FMO09729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11092956..11094094 | 9..1144 | 97 | | Minus |
