FMO09732.5prime Sequence
1147 bp (1050 high quality bases) assembled on 2010-10-20
> FMO09732.5prime
CAGTCGACATGAGTGAAGCTGCCAATCCAACGCCCTATGATTGCCACATA
GGTGCTGGTATTTACCACAGCATAGCAACGAGTTTTGCAGAACAAAATGT
AGTTGTATCACCACTACTACTGGAAGCCACTCTGTCCCTGCTCTTCCTGG
GATCGGATGGAGCCACCGCCGAGGAGCTGCAGAAACAACTGCGACTGAAG
CAACGTTTTGCCAGCAATGCCAAAATGGCCAATTTCTATGCCGCGGAACT
GGGCAATATCACAACAGATGCAGATACCTTCCTGCAGCTGCAGAATCGTT
TGATGCTGTCATCTGAATCTGGAGTGGCCGATGATTTCCAGAAGATTGCA
CAAACCTATTTCCATGCCACTGCCGAGTGTGTTGATCTGGAGCAAACGGA
GAAACTGCGTCGCCACATCAGCGAACAGATCCTGGCCAGCGTTGGAGGCG
GCAGCTGGAAGGATATTCACGTGGCAGGTGGTTCGTCAGCCAATACCCTG
CTCCTGCTGCTGGCCGCCAATCTGCAGAGCAAGTGGTTCCTGCCCTTCAG
TGCCTACAGAACCGGACTCTATGAGTTTCACAGCGGCAGCCAGGTGAAAT
CGGTGCCCATGCTCTTCGACGACGACATGTTCGTGAAGTTCGCTGAGCTG
AGGGATCTGGATGCGCGTGCCATTGAGCTGCCCTACGAGCACGCCGAGGA
GCTGTCCATGCTGCTCATTCTGCCCAATCAGCGTGGTGGCCTGCAGGAAC
TGGAGAAGCAGCTGCATGACCTGGATTTGGGTGCACTGCAGCAGCGAATG
CAGATGGAGGGCGTGCAGGTGTTGCTGCCCAAATTCAGTATCGATTTCGA
GTGCAGTCTGCGGCAGCCGTTGAAACAGCTCGGCTTTGAGGAGATATTTG
CTGCATCGGCGACTTCAAACATCTGCATGCATCGGCGAATCTGCCCATTG
CCGATGTTCTTCAAAAGCTGCGCATAAATCTGATGAGTCTGGATCCGGAT
CCGGACCCGAGTTACAAAGATGCCACAGAATATAAGCCCATGGTGATCAG
CAATCCTCCGCAGAATCTCGAGCTGACATCCATTCTTCTCGCATCGCATG
GAAAGTGACCTATCTGATGGTCACGTGGGTGCATGCCAGCTTCGAAC
FMO09732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:53:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn31A-RA | 1428 | CG4804-RA | 192..1329 | 9..1128 | 5230 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:53:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10062572..10063441 | 9..878 | 4350 | 100 | Plus |
| 2L | 23513712 | 2L | 10063499..10063639 | 877..1015 | 605 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:53:16 has no hits.
FMO09732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:46 Download gff for
FMO09732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4804-RA | 104..1250 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:16 Download gff for
FMO09732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn31A-RA | 185..1331 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:16 Download gff for
FMO09732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn31A-RA | 185..1331 | 1..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:16 Download gff for
FMO09732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10062565..10063441 | 1..878 | 99 | -> | Plus |
| 2L | 10063501..10063654 | 879..1028 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:16 Download gff for
FMO09732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10062565..10063441 | 1..878 | 99 | -> | Plus |
| arm_2L | 10063501..10063654 | 879..1028 | 97 | -> | Plus |
