FMO09734.5prime Sequence
1169 bp (1031 high quality bases) assembled on 2010-10-20
> FMO09734.5prime
CAGTCGACATGAAATTAAGACTTTTGCGGTGTTTGCGCCAACAGCCGGCG
AAACCAGCGGCGGTTATGACCCACAAGGAGGATCAGTACCCGGTATCACT
TGACCACCACGTGCTCAAGGACATGGCCAAGGGCGTGAGGGACACCACCG
TTAAGATCCTGCTACTAGGCACCGCCGAGTCGGGCAAGACGACCATCATC
AAGCAAATGCGGATACTGCACATCAACGGATTTACAGACGATGAACGGCG
AGAGAAGATACCCGAGATATATCAGAACATCCACGAGTCCATCCTGCAAT
TGGTGGGTCAGATGGGAGTGCTGGGCATTGATTTCGGCAGCTGTACCAGC
GAAAGATCGGCGGACTATATCCTCTCTCTGCCCGGATCGGCACCCGAATA
TATGAACGAGGAGTACTGCGACCACGTCACTACTTTGTGGAACGATGTGG
GTATTCGCGCCTGCTATGATCGCTCAAATGAGTTTCCCCTGCTGGATAGT
GCGAAATACTTCCTGGACAACTTTGTGCGGATCAGCGATGCTGAATACAT
ACCCAGCACCGAGGACATTCTGCACAGCCGTAAGATCACCACCGGCATCT
CGCAAATCACCTTCCGCGTACCCATTCCCAAGAGCATGGGTGGTGGCGAA
CAGCAGTTCCAAATGTACGATGTGGGTGGCCAAAGGGATCAGCGGAATAA
GTGGATTCAGGTATTCGAAGGCATACAGGCCGTATTGTTCCTGATCTCGT
GCAGCGAGTTCGATCAGAATCTGCGCGAGGATCCCAGCCAGAATCGTTTG
CAGGAGGCTCTGAAGTTGTTCAGAGCCGTGTGGCAGAATCGTTTCCTCGC
CTCCGCCGGATTGATCGTGTTCCTCAACAAGTACGACATCATGGAGCGAA
AGATTCGGGCCGGCAAGCACATTGTGGACTACTTTCCCGAATACGAGGAC
TTCTGCAGAGGCCGCAGCAGACATTGCTTTGGCGAGAGTGACTGGACGAA
GATGTTCATCAAACAGAAGCTGGTGATATCACACAGGAGCGTTCAGCGAC
CTCACGATCAGGTGATCTGGGTACTTCGAAAGGAGTGCTACTACACTTCA
CGGTCCCACGATACGCGATGCATCGTGAAGGTCTCTCGCAGTCAGAAATG
ATTCTCTCTCTACTCGGAA
FMO09734.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:52:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphaf-RA | 1825 | CG12232-RA | 333..1464 | 8..1124 | 5265 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:52:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16663013..16663548 | 1040..509 | 2485 | 98.9 | Minus |
| 3L | 28110227 | 3L | 16665080..16665303 | 241..18 | 1120 | 100 | Minus |
| 3L | 28110227 | 3L | 16664740..16664909 | 411..242 | 850 | 100 | Minus |
| 3L | 28110227 | 3L | 16663642..16663741 | 508..409 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:52:49 has no hits.
FMO09734.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:41 Download gff for
FMO09734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galpha73B-RA | 303..1456 | 1..1137 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:02 Download gff for
FMO09734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphaf-RA | 323..1476 | 1..1137 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:02 Download gff for
FMO09734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphaf-RA | 323..1476 | 1..1137 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:02 Download gff for
FMO09734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16665080..16665308 | 13..241 | 99 | | Minus |
| 3L | 16662906..16663548 | 509..1137 | 96 | <- | Minus |
| 3L | 16663642..16663739 | 411..508 | 100 | <- | Minus |
| 3L | 16664741..16664909 | 242..410 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:02 Download gff for
FMO09734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16658180..16658408 | 13..241 | 99 | | Minus |
| arm_3L | 16656006..16656648 | 509..1137 | 96 | <- | Minus |
| arm_3L | 16656742..16656839 | 411..508 | 100 | <- | Minus |
| arm_3L | 16657841..16658009 | 242..410 | 100 | <- | Minus |
