FMO09738.5prime Sequence
1144 bp (1041 high quality bases) assembled on 2010-10-20
> FMO09738.5prime
CAGTCGACATGTACCTCAATGAGAATAAAAATCGTATATGGGCGTGTGCC
CTGTGTTTTTTTTTATCACTGATCTGCGTGCAAGGACGTGTTGGTCTGGG
ACCTGGAGTACAGGAATGGGACTATGTGGAAGTTCGGAAGGGCGCTCACC
TCTTTTACTGGCTTCTATACACCACTGCCAATGTATCTCATTTCATAGAG
AGGCCGCTGGTAATCTGGCTGCAAGGGGGACCCGGTGTTGCATCCACCGG
CAGCGGGATATTTGAGCAGCTTGGACCCATCGACATCGAGGGCAAAACGC
GGGAAAGCAGTTGGTTGAAGCACGTGAATGTTCTTTTTGTGGACAGTCCG
GTGGGCACGGGATTCGCTTACGTTGAGCATCACAGCCTCTATGCCAGAAA
CAACAGGCAGATAGCCCTCGATCTTGTCCAGTTGATGAAGCAGTTTCTTA
CGAAGTATCCCGATTTCCGAAAGGTGCCCCTGCATATATTCTCCGAGAGC
TATGGCGGAAAAATGGCTCCCGAATTCGCGCTGGAATTGCATTTGGCGAA
GAAAGTAGGCGAATTAGAGTGCGATCTGAAATCCGTGGTAGTAGGCAATC
CATGGACCTCTCCACTGGACAGTATTCTGTCCTATGCCCCCTTTCTGCTC
CAATCGGGCATTGTGGATGATGACGGTTATCGTCGAATATCGCGACTGGC
CGGCGAGTTAGCTGCACTTGTCTATGGCGGAAAGTGGTTACGCGCCTTGA
TGAACGCGACCGAAGTTCAGGATGAGATCTCCGCCAGTGCGGGCGGAGTC
TTCATCTACAACACCCAGCGGCGGGTTCACGTGGACGAGGTCTACCGGTA
CGGCGAAGATCCGCAAATGAGCGACTTTATGCGATCCAATGTGACTAAAG
CACTGGGGCTAGGCAATATGCCCGTGTGGATGGAACAAACTCGACAGTCT
TCGAACGACTCAGTCAGGATATTTTAAGCCAGCGAATCAAATAGTTACCA
AATGCTGGAAGAGACGCCGAATACAGGTGGTATTTTATTCTGCATTCTGA
CTACTGTGGCCGCACACCCGCACGTACTGATCGTCGACTAGTGGGCCGCA
ATGAGTATGCTAGGCACCCTGTTACGCATCGAATGAGGCATGCT
FMO09738.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31823-RA | 1403 | CG31823-RA | 79..1133 | 9..1058 | 5045 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15899293..15900206 | 994..83 | 4455 | 99.7 | Minus |
| 2L | 23513712 | 2L | 15900370..15900446 | 85..9 | 385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:53:30 has no hits.
FMO09738.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:48 Download gff for
FMO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31823-RA | 35..1107 | 1..1070 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:24 Download gff for
FMO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31823-RA | 72..1144 | 1..1070 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:22 Download gff for
FMO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31823-RA | 72..1144 | 1..1070 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:22 Download gff for
FMO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15899293..15900204 | 85..994 | 99 | <- | Minus |
| 2L | 15900371..15900453 | 1..84 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:24 Download gff for
FMO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15899293..15900204 | 85..994 | 99 | <- | Minus |
| arm_2L | 15900371..15900453 | 1..84 | 95 | | Minus |
