FMO09740.5prime Sequence
425 bp (425 high quality bases) assembled on 2010-10-20
> FMO09740.5prime
CAGTCGACATGGAATCAGCCGTACGAAAGCGCAGAGTTCCCTTTCTCCAG
GACAATAGACATTCCGATAAACGGACATGCAACTTGTCAACAATATCACC
TCGCAGCACTCTAGTTCAAACAGTAAAGAAACCCGTCAAGAAGTTCTCTT
CGGATTTAGCCAATCTTCCACCGGTTCCCGCAATCGATGCTTTTGAGCGA
GGCTACCAAGTGGAATCGATATTGGACATGGTACAAAACATCCACAAGGA
GCAATTCCTCTACATAAAGTTTACGAATCTCATTGAACCCGAGTTGGTTC
CTTTGGAACTGGCCTTACAGCATGTTCCACACCTGCTTTCTGATTTCTAC
AAGGAATACGTCCAGGCCTGGCAGAAAATGGAACAACAGAAGTATGATGA
ATCTCCTGCAAGCTTTCTAGACCAT
FMO09740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:53:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Skadu-RA | 670 | CG42448-RA | 47..445 | 9..407 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:53:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15547668..15548018 | 57..407 | 1755 | 100 | Plus |
| 2L | 23513712 | 2L | 15547565..15547612 | 9..56 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:53:36 has no hits.
FMO09740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:49 Download gff for
FMO09740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42448-RA | 1..406 | 9..415 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:28 Download gff for
FMO09740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Skadu-RA | 39..452 | 1..415 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:25 Download gff for
FMO09740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Skadu-RA | 39..452 | 1..415 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:25 Download gff for
FMO09740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15547557..15547612 | 1..56 | 92 | -> | Plus |
| 2L | 15547668..15548025 | 57..415 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:28 Download gff for
FMO09740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15547557..15547612 | 1..56 | 92 | -> | Plus |
| arm_2L | 15547668..15548025 | 57..415 | 98 | | Plus |
