FMO09746.5prime Sequence
305 bp (305 high quality bases) assembled on 2010-10-20
> FMO09746.5prime
CAGTCGACATGAAGTTCTTCATTTTGATTTCATTCTTACTGGTCTGTCAA
GGGTCCAACGAAGAGGAGGATAACATAATAGCCGAGTTGTGCTTCAATCC
GAATTCTGGACCTCCTTGCCAGAAATTAAAAACATATTATTGGGATAAGG
AAAAGAATCGATGCGTGCTCTCTCGGTATTTAATGCAGCCTTGTGGTTTC
TTTGACACAATAGACATGTGCGATAAAATATGCACCAAGGAATCGTGGAC
AATATCTCATTTGGAAGTATATGTTCGAAATATGCCTGCAAGCTTTCTAG
ACCAT
FMO09746.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:53:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp33A1-RA | 359 | CG42472-RA | 20..302 | 5..287 | 1400 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:53:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11754142..11754345 | 287..84 | 1020 | 100 | Minus |
2L | 23513712 | 2L | 11754404..11754483 | 84..5 | 385 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:53:23 has no hits.
FMO09746.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:47 Download gff for
FMO09746.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp33A1-RA | 17..305 | 1..291 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:20 Download gff for
FMO09746.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp33A1-RA | 17..305 | 1..291 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:18 Download gff for
FMO09746.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp33A1-RA | 17..305 | 1..291 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:18 Download gff for
FMO09746.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11754138..11754344 | 85..291 | 99 | <- | Minus |
2L | 11754404..11754486 | 1..84 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:20 Download gff for
FMO09746.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11754138..11754344 | 85..291 | 99 | <- | Minus |
arm_2L | 11754404..11754486 | 1..84 | 96 | | Minus |