FMO09749.5prime Sequence
497 bp (497 high quality bases) assembled on 2010-10-20
> FMO09749.5prime
CAGTCGACATGTTCAAAAACCACTTGGAAATGATTGGGCGCAATGAGAGC
CCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCCCTGAAGGG
CTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACA
GCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACGAGCCCGCC
ACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTGCCAGTGAG
CCGCGACACATACGGCTACTCGCCCCGTGCCATCTACGATCATCACTACA
GCCGAACAAAGAAGGCCTGGAATGATCATCTGAAGCGCATGCAGGAGATC
GAGCGCAGGTACCCATCTCGCTATGGTCTCTACTTGAGGGACAAGCCACT
CACGCCCAACTCGCTGGTGCCCCTGGAGTACGAGCCAGAGGACAAGCTGC
TGGCTGAGCTCAACAAGGCTATAAGAGTTGCAAGCTTTCTAGACCAT
FMO09749.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mf-RN | 814 | CG6803-RN | 116..586 | 9..479 | 2340 | 99.8 | Plus |
| Mf-RG | 879 | CG6803-RG | 181..651 | 9..479 | 2340 | 99.8 | Plus |
| Mf-RA | 813 | CG6803-RA | 115..585 | 9..479 | 2340 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15178280..15178490 | 309..99 | 1040 | 99.5 | Minus |
| 3R | 32079331 | 3R | 15176184..15176295 | 468..357 | 560 | 100 | Minus |
| 3R | 32079331 | 3R | 15179038..15179129 | 100..9 | 460 | 100 | Minus |
| 3R | 32079331 | 3R | 15176362..15176412 | 360..310 | 255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:54:01 has no hits.
FMO09749.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:53 Download gff for
FMO09749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mf-RA | 107..594 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:42 Download gff for
FMO09749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mf-RA | 107..594 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:34 Download gff for
FMO09749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mf-RA | 107..594 | 1..486 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:34 Download gff for
FMO09749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15176177..15176293 | 359..476 | 97 | <- | Minus |
| 3R | 15176364..15176412 | 310..358 | 100 | <- | Minus |
| 3R | 15178280..15178489 | 100..309 | 99 | <- | Minus |
| 3R | 15179039..15179135 | 1..99 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:42 Download gff for
FMO09749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11001899..11002015 | 359..476 | 97 | <- | Minus |
| arm_3R | 11002086..11002134 | 310..358 | 100 | <- | Minus |
| arm_3R | 11004002..11004211 | 100..309 | 99 | <- | Minus |
| arm_3R | 11004761..11004857 | 1..99 | 95 | | Minus |
