Clone FMO09755 Report

Search the DGRC for FMO09755

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:97
Well:55
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18428-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09755.5prime Sequence

458 bp (458 high quality bases) assembled on 2010-10-20

> FMO09755.5prime
CAGTCGACATGGGAAAAAGTGAGAAAAAATCAAAGAAAAAGCATAAGGAG
AAGCGCAGGGAACACAAGGAAAAGCACAAGTCAAAGAAATCCAAGAAACA
CAACCGAAAAAAGGAAGAATCTCCGCCGATAGCTTCACCAACACCAATAC
AGCCTGAAAGGGTCAACCAGGAGGAGGAGGATGACTTTGCCATACCAATA
GCACTGATGAATAGCAAATCACATGCCCCGGAAACTCCAGAGGAATACCA
GCGCCGTCAGAGCCAGATCCGCAAAGAGGTGGACCCGGTGACGGGTCGCG
TCCGGCTCATCAAAGGCGACAGTGAGGTGCTGGAAGAGATTGTGACCAAA
GAGCGCCACCTGGAGATCAACAAGAAGGCCACCCGCGGTGATGGAGAGTT
CTACGAAGCCAGATCTCTGGACGCCGCCAAGCGTCGCAAAGCAAGCTTTC
TAGACCAT

FMO09755.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG18428-RA 577 CG18428-RA 30..461 9..440 2160 100 Plus
CG18428-RB 644 CG18428-RB 288..528 200..440 1205 100 Plus
CG18428-RC 523 CG18428-RC 167..407 200..440 1205 100 Plus
CG18428-RB 644 CG18428-RB 30..222 9..201 965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24109654..24109894 200..440 1205 100 Plus
3R 32079331 3R 24109396..24109588 9..201 965 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:54:20 has no hits.

FMO09755.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:55 Download gff for FMO09755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18428-RA 12..452 1..447 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:49 Download gff for FMO09755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18428-RA 26..466 1..447 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:41 Download gff for FMO09755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18428-RA 26..466 1..447 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:41 Download gff for FMO09755.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24109392..24109588 1..201 98 -> Plus
3R 24109656..24109897 202..442 98 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:49 Download gff for FMO09755.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19935114..19935310 1..201 98 -> Plus
arm_3R 19935378..19935619 202..442 98 <- Plus