Clone FMO09757 Report

Search the DGRC for FMO09757

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:97
Well:57
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13135-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09757.5prime Sequence

422 bp (422 high quality bases) assembled on 2010-10-20

> FMO09757.5prime
CAGTCGACATGAGGAAATCACTACTGATCGTTGGCTCCCTCCTGGTGACC
ATCTTTCTGGCCCATCTGCCAGTTGGTCTAGCCGTCTCGTGTGCCGATGA
TCCCACCGATACGGCTTGCATCGATTGCACAGATACCGCGAATGCAGCTG
AAGCCGATTGTACCACAACCACGGCTGCTCCGGAGGTAACCACAGCTGCC
GCAGAGGTAACCACAGCGGCCAGTGCCGATGGAGAAACCACCACCGCAGC
CGCTTCGGCCACCGACACGACCACCGCCTCATCCGGAGGCAGTGGCAAGA
AGCGCGTGAGGAGGACCTTCAGGCGTAAGGTGAGCCGCCCCAGGAAGATC
AAGAAGAGGAGGAGCAACCGAGGCAGGAACAATAGGAGGAGCCAAAACTC
GGGCGCAAGCTTTCTAGACCAT

FMO09757.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG13135-RC 643 CG13135-RC 31..428 7..404 1990 100 Plus
CG13135-RA 576 CG13135-RA 31..428 7..404 1990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10122344..10122741 404..7 1990 100 Minus
Blast to na_te.dros performed on 2014-11-26 14:54:27 has no hits.

FMO09757.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:57 Download gff for FMO09757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13135-RA 26..433 1..410 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:53 Download gff for FMO09757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13135-RA 26..433 1..410 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:45 Download gff for FMO09757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13135-RA 26..433 1..410 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:45 Download gff for FMO09757.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10122339..10122746 1..410 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:53 Download gff for FMO09757.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10122339..10122746 1..410 99   Minus