FMO09758.5prime Sequence
530 bp (530 high quality bases) assembled on 2010-10-20
> FMO09758.5prime
CAGTCGACATGGATAAACTAACGACAATTAGTGCCACGCTCTTCATGGCG
GCCGATGTCTTTGCGATTGTGAGTCTGGCCCTTCCCGACTGGATCATCAC
GGAGTCCGGAACGGGTGACATCCGATTGGGACTGATGTGGACCTGCATGA
CGCTATATAACCGACCGCAAGTGTGCTATACACCCGAACTGCAGCCGGAG
TGGCTGATTGCACTGATCTGCATCTTTGTGGGCTGCATCTGCGTGACCAC
CACCGTCATTCTGCTGGCGTCGTCATCCTGCAACCGGAATGTGATTCCGT
ACGCGCGCTGGGTGGGATTCACGGCCATGGTGCTCTTCTGCATGGCGGCC
GTCGTCTTCCCGCTGGGATTCCACGTAGAGGAGATCGGCGGACAGGCCTA
CCAGCTGCCCAACACATTCAAGATTGGCATCTCCTACATCATGTTCGTCC
TGGCCCTGTGGATCACCGTCGTGTCTGAGCTCTTTGCCGGCAAGGTCTGC
CTGCCGCACTTCGCAAGCTTTCTAGACCAT
FMO09758.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:53:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14182-RB | 626 | CG14182-RB | 51..554 | 9..512 | 2520 | 100 | Plus |
| CG14182-RD | 1032 | CG14182-RD | 51..554 | 9..512 | 2520 | 100 | Plus |
| CG14182-RA | 932 | CG14182-RA | 51..554 | 9..512 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:53:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19979191..19979589 | 512..114 | 1995 | 100 | Minus |
| 3L | 28110227 | 3L | 19979655..19979762 | 116..9 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:53:57 has no hits.
FMO09758.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:52 Download gff for
FMO09758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 1..507 | 9..516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:40 Download gff for
FMO09758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 47..559 | 1..517 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:33 Download gff for
FMO09758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 47..559 | 1..517 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:33 Download gff for
FMO09758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19979186..19979588 | 115..517 | 99 | <- | Minus |
| 3L | 19979657..19979766 | 1..114 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:40 Download gff for
FMO09758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19972286..19972688 | 115..517 | 99 | <- | Minus |
| arm_3L | 19972757..19972866 | 1..114 | 96 | | Minus |
