FMO09760.5prime Sequence
612 bp (521 high quality bases) assembled on 2010-10-20
> FMO09760.5prime
CAGTCGACATGAATGTGGACAAAGCCAGAGACGAGATGATTGAGATGTCC
GAGCAGGTGTGGAAGGATGCGGAGCAGTGGCAAAGAGGTATCCACAATGG
TCAGGCGGTCATGAAGCAGATCAAGGCCATAAATCTTAAGCTCTTCAGCA
CCGAGAATAGGCTGAACAACGCGGACTCGCGTAAGGAGCTCCAGGCCACA
GGGAAACGGATCAACCACTTGTACCAATGCCTCCAACGACCTCTCGCCAC
GATAGGCAACATTTTAAGGACCCTGACCGGTATCAGGGACAACACTGCCA
GGATGTTGAGCCGCTTGACCATATTCTTGGACGATGAAACACTGGCGAAG
CACAGAATACGGCCCAAGCTCGAGAGTTCCAAGCTTCTGAAGATGCTGCA
GTTCCTAAGCCACCGTTACGATACCGAATGGGAGGTCAAGGAAATGGTCG
TGAATGAATTGGAGAGAATCAGCAACTCCTATGATCTGGATCTTGCAATG
GCGTGCTGGAGCACTTGCAGTCCCGCAGGAGTCCAGAGTTCGCAAAGATG
ATGCGCGGAGTATTACTGGATCATTGATCGCCGGCAACCTTTTGCAAGCT
TTCTAGAACCAT
FMO09760.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:51:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12984-RA | 824 | CG12984-RA | 42..628 | 7..593 | 2860 | 99.3 | Plus |
| CG12984-RB | 421 | CG12984-RB | 88..225 | 456..593 | 630 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20991714..20992160 | 7..453 | 2235 | 100 | Plus |
| 3L | 28110227 | 3L | 20992597..20992734 | 456..593 | 580 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:51:13 has no hits.
FMO09760.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:25 Download gff for
FMO09760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 1..588 | 9..594 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:45:16 Download gff for
FMO09760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 33..637 | 1..604 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:14 Download gff for
FMO09760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 33..637 | 1..604 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:14 Download gff for
FMO09760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20991705..20992160 | 1..453 | 99 | -> | Plus |
| 3L | 20992595..20992743 | 454..604 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:45:16 Download gff for
FMO09760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20984805..20985260 | 1..453 | 99 | -> | Plus |
| arm_3L | 20985695..20985843 | 454..604 | 94 | | Plus |
