FMO09762.5prime Sequence
1152 bp (1044 high quality bases) assembled on 2010-10-20
> FMO09762.5prime
CAGTCGACATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATAAACAT
GGTACTTTCTACGCCGGTCAGCTGGTAAAAGGATGCGCGACCCTTAAATG
TGACAGGTCCAAGGAGGTTCAAGCTGTGCTGCTCAAGGTAGTCGGATATT
CTATAACCAAGTGGAGCGAAAAGAGTCTGGGCTCGACAAAACTCTACGTG
GGCCGGGAGGATTATCTATCATCAAATACTTATCTCGTGGGTTCCGAGCA
AAACAACACTCACAACAACACTCACAGACTCACTATTGAGGCTGGGGTTC
ACAGCTACAACTTCACCTGCCAGCTGCCCTATCAATGCCCCTCGTCCTTT
GAGGGTCGCCATGGATGCATCCGCTATATAGTGAAAGTCCTGCTGATCAG
ACCGTGGAAGTTCGATCAGGCCTACACAAAGGGCTTCACGGTTCTCAAGA
TGCTGGATCTCAACTTTGACACTCCCCAGCTAAAGTCCGCTGCCCACAGC
GAGGGTTACCGCACCTTTTGCTGTGGTCCATGCAAGACGGATCCTTTAAA
ACTGGAGCTGCACCTTCCACAAGCAGGCTACGTTCCTGGCCAGAAGATTC
CCGTGACCATTGTGGTAGTCAACAACACTGCCGTAGCCGTCTCCGAAATC
CGACTCTCTCTGGTAATGCTGGTGAGATACTACAGCGTCAGTCCTGAACA
CTCTCGAGTGGAGCGATTAATAATATCGCGAGCTAAGGGGGAATCGGTGC
TGAAGCAGTGCACCCGATCCCAGACCATCGATTTGCCCGTACCCTCAACG
CCGCCCACCTGCGTGGAGTTGAGCAACCTCATCCAGATCGCCTACCAACT
GGAGGTTGAGGCGTTGGTTAAGAGTCTACGCGAACAACAGCTGATGGTCA
TGCCGGTTACCGTTGGCACCATTCCTCTGGCGGTTTCGGGCATTGTGTTC
AACACCTCCTCGGCGGAGCGCCACTACGAAGACGGATTCAGAAGATCCTC
CGACGAGCTACCATGGTTACCGCCACTTGAACGCTGCCCAGCGACTGCAT
CCAGTGCTGCTGATCACGCTTCCATAATGAGAGTTCCGTCCACTCACGGG
CAATTTCACGAAAAGAACTCATGCTTCGGACATGACTGCCTCACTTATTC
CG
FMO09762.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18747-RB | 1408 | CG18747-RB | 46..1190 | 9..1129 | 4980 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:51:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7781662..7782152 | 972..484 | 2340 | 99.4 | Minus |
| 3R | 32079331 | 3R | 7782396..7782628 | 485..253 | 1165 | 100 | Minus |
| 3R | 32079331 | 3R | 7782686..7782816 | 252..122 | 655 | 100 | Minus |
| 3R | 32079331 | 3R | 7783287..7783401 | 123..9 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:51:21 has no hits.
FMO09762.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:26 Download gff for
FMO09762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18747-RB | 1..1083 | 9..1078 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:45:20 Download gff for
FMO09762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18747-RB | 46..1128 | 9..1078 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:18 Download gff for
FMO09762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18747-RB | 46..1128 | 9..1078 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:18 Download gff for
FMO09762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7782396..7782628 | 253..485 | 100 | <- | Minus |
| 3R | 7782686..7782814 | 124..252 | 100 | <- | Minus |
| 3R | 7783287..7783401 | 9..123 | 100 | | Minus |
| 3R | 7781560..7782150 | 486..1064 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:45:20 Download gff for
FMO09762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3608118..3608350 | 253..485 | 100 | <- | Minus |
| arm_3R | 3608408..3608536 | 124..252 | 100 | <- | Minus |
| arm_3R | 3609009..3609123 | 9..123 | 100 | | Minus |
| arm_3R | 3607282..3607872 | 486..1064 | 97 | <- | Minus |
