FMO09764.5prime Sequence
1153 bp (1056 high quality bases) assembled on 2010-10-20
> FMO09764.5prime
CAGTCGACATGGCTGCTATTGCCGCCCTGCCAACAACAACGTTGCGGCGC
AACAACAACAACAACACCAAAGGGATCAAATCCCGTCGCAATGAGCGTAA
CATCCTGACATTCTACGAAAAGATTGCCGTAATCCGTTACTATGACGAGA
CCAACATCTCTAGGAACAGTCTGGCCAAGATGTTCCACTGCTGCGCCACC
CAAATACGTAGAATCTTGGATAAGAAAAAGGATCTGCTGCAGCAGTTGGC
CACCTTAAGCGAGGCAGATGCCTCCATTATAATCGAAGAGATGACGCGCA
AGCGCCGCAAGTTCGAAATGAGTGCCATCAGCTTCCTACTACACGAGTGG
GTGGAAAGGTGCATCCAAATGCAGTTGAACATCAGCATAAGGAACCAAAA
ACTGAAGGAAACCGCCATCCGGATGGCAGCTGTGTTGAACCTGCCATCCT
TCAGACCATCCTATCGATGGCTAAGCCGATTCCGCAACAAGTACAAGTAC
GAGGCCGATGAATTGGGCTACCAGGGCGAAAATCCCTTGAACCAGGACCT
GCCTGTCGAAGACATCATTGTGGAGTTTAAGCATGCACTGCCGAACTTCA
TGCAACGGGAGCTGGATAATCCAGGCGAAGCAATCTCAAAAGCAGCTGTT
ATGGCAGATTTTGTCAATCTCTCCAGCGAAAACAGTATCATGTCCGATCA
TCCAGAGGGGGATAATGAAGTGGAGCTGGTAACATGTGAGCCCACCATGA
TGTCCTCACCATCCAGCACACCAGATGCTGCAGAGGGGGAAATACCTCTG
CAGGCACATGGCGACCAGGAAAACCCGGATGATCAGATTAACGCTGGAAC
CAGTACTCTTCTGAATGGGGTTTTTCCGCATCTAGCCATTATCCACCAGT
TCGCTCTGATGAACTCGGATGTACAGGCATTGGAACTTATCTCCCAGCTG
GGAGTGCACATGCAGCAACAGGCTGTTTCTGGAGCTTATCATACCTGTCG
CTGGCGACTACCGATGAGATGGGCAGACGATCAGAGAAATCCCCTCTTTC
GAACTGCCACCGGAAGTATTTACGCGATATCGATGACTCGATGATCGAGG
CAAGCTTTCTAGACAATCGTGGCGCGCGGCCCAGGTTAATGGTCTAAATC
TCT
FMO09764.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:51:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ebd2-RB | 1821 | CG12972-RB | 448..1548 | 9..1099 | 5205 | 98.8 | Plus |
| ebd2-RA | 1606 | CG12972-RA | 233..1333 | 9..1099 | 5205 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:51:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21345056..21346076 | 1087..74 | 4685 | 98.6 | Minus |
| 3L | 28110227 | 3L | 21346689..21346754 | 74..9 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:51:28 has no hits.
FMO09764.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:28 Download gff for
FMO09764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12972-RA | 1..1104 | 9..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:45:22 Download gff for
FMO09764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ebd2-RA | 225..1336 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:21 Download gff for
FMO09764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ebd2-RA | 225..1336 | 1..1103 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:21 Download gff for
FMO09764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21346689..21346760 | 1..74 | 94 | | Minus |
| 3L | 21345037..21346075 | 75..1103 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:45:22 Download gff for
FMO09764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21338137..21339175 | 75..1103 | 98 | <- | Minus |
| arm_3L | 21339789..21339860 | 1..74 | 94 | | Minus |
