FMO09773.5prime Sequence
454 bp (358 high quality bases) assembled on 2010-10-20
> FMO09773.5prime
CAGTCGACATGAAGGCTTTCATCGTTCTGGTTGCCCTGGCCTGTGCCGCC
CCAGCTTTCGGTCGCACCATGGACCGTTGCTCCCTGGCCCGCGAGATGTC
CAACCTGGGCGTTCCTCGTGACCAATTGGCTCGTTGGGCCTGTATTGCCG
AGCACGAGTCCTCCTACCGCACCGGAGTGGTTGGTCCCGAGAACTACAAC
GGCTCCAACGACTACGGAATCTTCCAGATCAACGACTACTACTGGTGCGC
TCCTCCCAGCGGTCGCTTCTCCTACAACGAATGCGGATTGAGCTGCAACG
CTCTCCTGACCGACGACATCACCCACTCCGTCCCGATGTGCCCAAAAGGT
CCTCAGCCAGCAGGGATGGTCCCGCCTGGTCCACCTGGCCCCTACTGCCA
CGGAATGGTTTGCCGTCCATCGATGAATGGCTTCCCCAAGCTTTTCTTAA
ACAT
FMO09773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LysD-RA | 480 | CG9118-RA | 19..432 | 8..426 | 1895 | 97.6 | Plus |
| LysB-RB | 611 | CG1179-RB | 22..436 | 7..426 | 1675 | 94.3 | Plus |
| LysB-RA | 486 | CG1179-RA | 22..436 | 7..426 | 1675 | 94.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1210799..1211178 | 389..8 | 1780 | 99 | Minus |
| 3L | 28110227 | 3L | 1207392..1207772 | 7..389 | 1545 | 94.8 | Plus |
| 3L | 28110227 | 3L | 1212952..1213330 | 9..389 | 1490 | 94 | Plus |
| 3L | 28110227 | 3L | 1210484..1210726 | 8..250 | 1020 | 94.7 | Plus |
| 3L | 28110227 | 3L | 1227770..1228134 | 7..372 | 615 | 79.7 | Plus |
| 3L | 28110227 | 3L | 1218357..1218607 | 331..81 | 520 | 80.5 | Minus |
| 3L | 28110227 | 3L | 1194914..1195241 | 389..60 | 485 | 77.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:51:57 has no hits.
FMO09773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:32 Download gff for
FMO09773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysD-RA | 9..442 | 1..439 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:45:38 Download gff for
FMO09773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysD-RA | 9..442 | 1..439 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:36 Download gff for
FMO09773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysD-RA | 9..442 | 1..439 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:36 Download gff for
FMO09773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1210754..1211186 | 1..439 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:45:38 Download gff for
FMO09773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1210754..1211186 | 1..439 | 95 | | Minus |
