Clone FMO09779 Report

Search the DGRC for FMO09779

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:97
Well:79
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9065-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09779.5prime Sequence

290 bp (290 high quality bases) assembled on 2010-10-20

> FMO09779.5prime
CAGTCGACATGGGCAACAGTGCATCTCAAGGAGTTGCAGCTCCAAGTGTT
TCGGCGGCCCACCCGTTGACCACCGCATCCGCAGCCACCGCATCCACAAC
CACCGCATCCGCAGCCACCGCATCCGGCGAGAAGCCCAAGTGCAAGGCCT
GTTGCGCCTGCCCGGAGACCAAGAGGGCACGTGACGCCTGCATTGTGGAG
AACGGCGAGGAGAATTGCTTGGCGCTGATAGAGGCGCACAAGAAGTGCAT
GCGCGATGCCGGCTTCAATATCGCAAGCTTTCTAGACCAT

FMO09779.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG9065-RA 521 CG9065-RA 103..366 9..272 1320 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:52:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15084353..15084534 190..9 910 100 Minus
X 23542271 X 15084184..15084266 272..190 415 100 Minus
Blast to na_te.dros performed on 2014-11-26 14:52:19 has no hits.

FMO09779.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:36 Download gff for FMO09779.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9065-RA 57..322 6..272 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:45:49 Download gff for FMO09779.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9065-RA 101..366 6..272 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:47 Download gff for FMO09779.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9065-RA 101..366 6..272 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:47 Download gff for FMO09779.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15084184..15084265 191..272 100 <- Minus
X 15084353..15084536 6..190 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:45:49 Download gff for FMO09779.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14978217..14978298 191..272 100 <- Minus
arm_X 14978386..14978569 6..190 99   Minus