FMO09781.5prime Sequence
503 bp (503 high quality bases) assembled on 2010-10-20
> FMO09781.5prime
CAGTCGACATGGCTCAAGAAAATCAAGCTGTCGACAATGGACTGCCCTGC
AACGCTTACCTGGACACAAGCCTGCGAGAGGACGAAAACATGCAACACAT
CCTGAAAACCTTTTACAGCAGCATCGAACTCCTGGAAGCCGACACGGAGA
AGGCACTGGCGCTACAGGCAGAACGCACATTGAACACAAATGAACAAATA
AAATTGGATAGCTACCTTGTGTACTTGAACAGCACACTGTTTTTCATATA
CCTGAAACTGCAGGGTGAAGATGCCTCAAATCATGCTGTGATGCACGATT
TGCGTCGTACAAGGGACCTACTTGCCCGCGATAAGAAAATAAACGATGCT
CTAGCGGCGCCAAGACTGGATATGCCCGCTGCCAAGCGATTTATCGCAGC
TGGAACCCACACACGATTTGTGGACATGAACGGAGTTATGGTCTCCGAAA
AACAATATAATAAAAGCAAGCAAGAAACTCCCAAAGCAAGCTTTCTAGAC
CAT
FMO09781.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp47-RB | 1285 | CG8928-RB | 158..636 | 7..485 | 2395 | 100 | Plus |
| Rrp47-RA | 842 | CG8928-RA | 77..555 | 7..485 | 2395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15945054..15945328 | 7..281 | 1375 | 100 | Plus |
| X | 23542271 | X | 15945397..15945600 | 282..485 | 1020 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 14:54:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Galileo | 2304 | Dbuz\Galileo GALILEO 2304bp | 1746..1786 | 159..199 | 106 | 73.2 | Plus |
FMO09781.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:57 Download gff for
FMO09781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8928-RA | 40..527 | 1..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:55 Download gff for
FMO09781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp47-RA | 73..560 | 1..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:46 Download gff for
FMO09781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp47-RA | 73..560 | 1..493 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:46 Download gff for
FMO09781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15945050..15945328 | 1..281 | 98 | -> | Plus |
| X | 15945397..15945605 | 282..493 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:55 Download gff for
FMO09781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15839083..15839361 | 1..281 | 98 | -> | Plus |
| arm_X | 15839430..15839638 | 282..493 | 98 | | Plus |
