FMO09786.5prime Sequence
413 bp (413 high quality bases) assembled on 2010-10-20
> FMO09786.5prime
CAGTCGACATGTTTGGCCCGCTGCAGATTATCGTTTTTGCCACTATCTTG
GTGGCCGTGGCCATGGCCATGCAGCCACTGGAGGACAATGAGCGAACCCA
TCATCTGAACCACAAGCGCCAGTTGTCGCAACAGCACCACCACCACCACC
AAAAGCTCCAGGAGGTGAGGCATTCGGGCCATGATAGTCTGAAACATGGT
GGTTCCCACGTTAAGGAGCATCAAGCGCATCACTCTGAGCGAAAGGCCAG
GCAGAGCCACAAGGAGCCGGGCCACAAGAAGAGTCACCACCAGAAGGAGC
ACCGCCAGCAGCAGGACAACCACACCCGCAAATCCCGATCGCATTCCAAG
GGCAGCAAGCAGCATCACAAGCGGCACACGGGATCGCGTCGCCACGCAAG
CTTTCTAGACCAT
FMO09786.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RB | 831 | CG34232-RB | 229..615 | 9..395 | 1935 | 100 | Plus |
CG34232-RC | 775 | CG34232-RC | 190..559 | 26..395 | 1850 | 100 | Plus |
CG34232-RA | 702 | CG34232-RA | 117..486 | 26..395 | 1850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12165125..12165511 | 395..9 | 1935 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 14:54:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 696..737 | 293..334 | 111 | 73.8 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 8578..8619 | 293..334 | 111 | 73.8 | Plus |
FMO09786.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:59 Download gff for
FMO09786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 189..578 | 5..395 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:47:02 Download gff for
FMO09786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 206..595 | 5..395 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:53 Download gff for
FMO09786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 226..615 | 5..395 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:53 Download gff for
FMO09786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12165125..12165514 | 5..395 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:47:02 Download gff for
FMO09786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8052630..8053019 | 5..395 | 99 | | Minus |