FMO09787.5prime Sequence
524 bp (524 high quality bases) assembled on 2010-10-20
> FMO09787.5prime
CAGTCGACATGCCAGATGCCGAGCAACTACCGGACGGCTGGGAGAAGCGC
ACTAGCCGCTCCACAGGAATGAGCTATTATCTCAATATGTACACAAAGGA
GTCGCAGTGGGATCAGCCCACAGAGCCGGCGAAGAAGGCGGGCGGAGGAT
CCGCCGGCGGCGGAGATGCACCGGACGAGGTGCATTGCCTGCATCTGCTG
GTTAAGCACAAGGGCAGTCGGCGTCCCAGCTCGTGGCGCGAGGCGAACAT
CACGCGCACCAAGGAGGAGGCCCAGCTGCTCCTCGAGGTCTATCGCAACA
AAATCGTCCAGCAGGAGGCCACATTCGACGAGCTGGCCCGCTCCTACTCC
GACTGCAGCTCCGCCAAGAGGGGCGGCGACCTGGGAAAGTTCGGCAGAGG
TCAGATGCAGGCGGCTTTCGAGGACGCTGCCTTCAAATTGAACGTCAACC
AGCTGTCGGGCATCGTCGACAGCGACTCCGGCCTGCACATCATCCTGCGC
AAGGCAGCAAGCTTTCTAGACCAT
FMO09787.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dod-RA | 1021 | CG17051-RA | 93..591 | 8..506 | 2495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21345617..21345954 | 64..401 | 1690 | 100 | Plus |
| X | 23542271 | X | 21346320..21346428 | 398..506 | 545 | 100 | Plus |
| X | 23542271 | X | 21345450..21345509 | 8..67 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:54:46 has no hits.
FMO09787.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:59 Download gff for
FMO09787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 68..569 | 1..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:47:04 Download gff for
FMO09787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 90..591 | 1..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:54 Download gff for
FMO09787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 90..591 | 1..506 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:54 Download gff for
FMO09787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21345620..21345952 | 67..399 | 100 | -> | Plus |
| X | 21346322..21346428 | 400..506 | 100 | | Plus |
| X | 21345447..21345508 | 1..66 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:47:04 Download gff for
FMO09787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21216474..21216535 | 1..66 | 93 | -> | Plus |
| arm_X | 21216647..21216979 | 67..399 | 100 | -> | Plus |
| arm_X | 21217349..21217455 | 400..506 | 100 | | Plus |
