FMO09789.5prime Sequence
347 bp (347 high quality bases) assembled on 2010-10-20
> FMO09789.5prime
CAGTCGACATGGTTTACATATGCACTCTTGTGGTGTTGATCTTTCCCGTC
TTGTTGTTGGGTGCACCATGGGAAGGGTCGCATCCTAAGTCTCAGGTGGA
ATACATCAGCAACGACAAGAGAGTTGATTCTGGCTTCGCCAACCCCAATA
TCGTGCCCATCACCCAGCCGTCGGTCGTAACGCAAACAGCTCCTCCTCCG
CCGCCAAATTCCAAAAACTTTGCATATAGTCCGATGACGCAGAGCTGGAC
CCTCATTGCGCCAGGCGATCCGCTGCCCAATAATGACACCCTCGTCTGGA
ACCAGAGCAATGACAAATGGCTCACTCGCGCAAGCTTTCTAGACCAT
FMO09789.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13877-RC | 416 | CG13877-RC | 20..340 | 9..329 | 1605 | 100 | Plus |
| CG13877-RB | 507 | CG13877-RB | 113..436 | 9..329 | 1565 | 99.1 | Plus |
| pyx-RB | 2502 | CG17142-RB | 1947..2251 | 329..25 | 1525 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 218283..218587 | 25..329 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:54:53 has no hits.
FMO09789.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:02:01 Download gff for
FMO09789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13877-RA | 109..437 | 2..333 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:47:08 Download gff for
FMO09789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13877-RC | 15..345 | 2..335 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:59 Download gff for
FMO09789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13877-RC | 15..345 | 2..335 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:59 Download gff for
FMO09789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 218283..218592 | 25..335 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:47:08 Download gff for
FMO09789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 218283..218592 | 25..335 | 99 | | Plus |
