FMO09792.5prime Sequence
326 bp (326 high quality bases) assembled on 2010-10-20
> FMO09792.5prime
CAGTCGACATGACGAATTATGAGAACATTATAAATTTGCCATTAAACTTT
AATGCAAATAATCACGCCGCTGGTAATAATGAGAACAATGCCAAAATTGC
CATCGTTGGCGAGCAGCTGCTGAATAAGATGTCGCAGCGGGATTTCTCCG
AAAGCGGCGCTCCCTACCGCCGAAGAACTTCTTCGTTGGCCATTTGGAGG
GCATGTTCCTGCTCTCTGTGCGTGTTATTTGACTTTGACCATTGGCAGCA
GAAACGCCATATCATGTCTGCGAGATCTACTCGGCTAGCACCGCCAACGC
TCGGAAGAGCAAGCTTTCTAGACCAT
FMO09792.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:55:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43163-RC | 7878 | CG43163-RC | 107..251 | 9..153 | 725 | 100 | Plus |
| CG43163-RD | 7970 | CG43163-RD | 199..343 | 9..153 | 725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:55:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8491308..8491463 | 308..153 | 780 | 100 | Minus |
| 3L | 28110227 | 3L | 8494119..8494262 | 152..9 | 720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:55:02 has no hits.
FMO09792.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:02:02 Download gff for
FMO09792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6902-RA | 43..354 | 1..313 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:47:13 Download gff for
FMO09792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43163-RD | 192..343 | 1..153 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:04 Download gff for
FMO09792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43163-RD | 192..343 | 1..153 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:04 Download gff for
FMO09792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8494119..8494267 | 1..152 | 97 | | Minus |
| 3L | 8491303..8491463 | 153..313 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:47:13 Download gff for
FMO09792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8484403..8484563 | 153..313 | 98 | <- | Minus |
| arm_3L | 8487219..8487367 | 1..152 | 97 | | Minus |
