FMO09793.5prime Sequence
515 bp (515 high quality bases) assembled on 2010-10-20
> FMO09793.5prime
CAGTCGACATGGTTTACGAAAGTGGATTTACGACCCGCAGAACCTACTCC
TCGAGGCCGGTGACAACTTCCTACGCAGTTACGAGAACGAAGAGAACACC
AATTGACTGGGAGAAAGTTCCGTTCGTGCCGCGGCCGTCGCTCATCTCGG
ATCCGGTGACCGCCTTCGGAGTGCGGCGTCCCGATCTCGAGCGGCGCCAG
CGGTCGATCCTCGATCCGATCAATCGGGCCTCCATCAAGCCCGACTACAA
GCTGGCCTACGAGCCCATTGAGCCGTATGTCTCCACCCGGGACAAGAACC
GGACGCGGATCCTGGGCATGGTGCGCCAGCACATCGACACCGTGGAGGCG
GGTGGCAATACCGCCGGCCGCACCTTCCGCGACAGTCTGGACGCCCAGCT
GCCGCGACTCCATCGCGCCGTCTCCGAGTCCTTGCCAGTTCGCCGGGAGA
CCTACCGCAACGAGAGGTCGGGCGCGATGGTCACCAAGTACTCCTACGCA
AGCTTTCTAGACCAT
FMO09793.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:55:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG45078-RA | 1925 | CG45078-RA | 122..612 | 7..497 | 2455 | 100 | Plus |
| fau-RA | 1020 | CG45077-RA | 122..199 | 7..84 | 390 | 100 | Plus |
| CG45076-RI | 2109 | CG45076-RI | 122..198 | 7..83 | 385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:55:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10774652..10775066 | 497..83 | 2075 | 100 | Minus |
| 3R | 32079331 | 3R | 10777177..10777253 | 83..7 | 385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:55:06 has no hits.
FMO09793.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:02:03 Download gff for
FMO09793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fau-RB | 105..599 | 1..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:47:14 Download gff for
FMO09793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fau-RB | 118..612 | 1..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:06 Download gff for
FMO09793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG45078-RA | 118..612 | 1..497 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:06 Download gff for
FMO09793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10774652..10775065 | 84..497 | 100 | <- | Minus |
| 3R | 10777177..10777257 | 1..83 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:47:14 Download gff for
FMO09793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6600374..6600787 | 84..497 | 100 | <- | Minus |
| arm_3R | 6602899..6602979 | 1..83 | 96 | | Minus |
