FMO09794.5prime Sequence
551 bp (551 high quality bases) assembled on 2010-10-20
> FMO09794.5prime
CAGTCGACATGTCGGCGTTTGTGAAAACCGTGTGCTTGGCCCAAAAGCTG
TGCGCCGCCAATCCCGTCGTGGCTCGCCAGGCGATCCGCAGCATGGCTGG
CTGGAATAAGGACTACAAGCCGGGTCCGTATCCACAGACGGAGAAGGAGC
GCCTGGCGGCGGCCAAGAAGTACTATCTGTTGCCGGAGGAGTACAAACCG
TATGCGGACGATGGTCTGGGCTACGGAGATTATCCCAAATTGGGCTACGG
TCTGGGTGTGGAGGCCAAGGACTCGTACTATCCCTGGGACTATCCGGAGC
ACAAGCGCAACCAACACGAGCCCATCTCGGCGGATCATGATCTGTACAGC
GAGGATCGCTGGTCGCAGGCCGAACCGCCACGCTACAGCAATGCGTACTA
CTTTGCCTGCTTCCTGGGCGTGATGTCCGGCTGCCTGGCACTCTACTACT
GGCTGGATGACAAGAAGATGTACCGCCCCGTGGCCGCCAAGCAATATCCC
AGCCCTGGCGTCAAGCACTACACCTTCGAGAAGGCAAGCTTTCTAGACCA
T
FMO09794.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3192-RC | 706 | CG3192-RC | 78..602 | 9..533 | 2625 | 100 | Plus |
| CG3192-RB | 805 | CG3192-RB | 177..701 | 9..533 | 2625 | 100 | Plus |
| CG3192-RA | 1321 | CG3192-RA | 693..1217 | 9..533 | 2625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6677652..6677881 | 323..94 | 1150 | 100 | Minus |
| X | 23542271 | X | 6677366..6677575 | 533..324 | 1050 | 100 | Minus |
| X | 23542271 | X | 6678000..6678084 | 93..9 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:54:35 has no hits.
FMO09794.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:58 Download gff for
FMO09794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3192-RA | 688..1224 | 1..541 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:46:57 Download gff for
FMO09794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3192-RA | 688..1224 | 1..541 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:48 Download gff for
FMO09794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3192-RA | 688..1224 | 1..541 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:48 Download gff for
FMO09794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6677359..6677575 | 324..541 | 98 | <- | Minus |
| X | 6677652..6677881 | 94..323 | 100 | <- | Minus |
| X | 6678000..6678089 | 1..93 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:46:57 Download gff for
FMO09794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6571685..6571914 | 94..323 | 100 | <- | Minus |
| arm_X | 6572033..6572122 | 1..93 | 95 | | Minus |
| arm_X | 6571392..6571608 | 324..541 | 98 | <- | Minus |
