FMO09806.5prime Sequence
821 bp (821 high quality bases) assembled on 2010-10-27
> FMO09806.5prime
CAGTCGACATGGCTACAACCGCAAGCCAATCCAACTGCTGGCTGCTGCAG
CGCCGCCAGCTGGACAGCATCACAACAGTTCTTGCCGAGATGATAGCCAC
CGCTATGCTGATGTTCCTCGGATGCATGGGCAGTGTGGAGAACTCCGTGT
TCACCAACTCGGACTTCCAGAGCGCCCTGAACTTCGGATTCGTGGTGCTA
ATCTGCATCCAGTGCTTCGGTTGCGTGTGTGGCGCCCACCTGAATCCCGC
CGTCACCCTGGCCACCTACGTCTACAACATGATCTCCCTGCCGATGGCTT
TGGCCTATTTTGTGGCCCAGATGGTGGGCGCCTTCATTGGCTACGGCCTG
CTGAAGGCGGTGCTCCCGGAGAGCGCCATCTACAGCGCTGAGAACCCCAA
TGGCGTCTGCCTCACCTCGCTCAACAGCACCTTGACCCCATGGCAGGGAC
TGGCCGTGGAGTTCCTGATCACCTGCGTCCTCATCTCCGTGTGCTGCGGC
GTCTGGGATCCCCGCAATGCCACCAAGCAGGACTCGCTGCCAGTGCGATT
TGGTCTGGCCATCGCATGCCTGTCGCTCACAGCGGGACAACTGACTGGGG
CTAGTATGAATCCAGTCCGATCCTTTGCTCCGGCCATTTGGAACGGATTC
TGGGATGACCACTGGATCTACTGGGTGGGTCCCATGGCGGCTGCCCTGAT
CACCTCGGTGATCTACAAGCACGCCTTCCGGCGGGAGCTGGAGGAATCGG
AGGTGGACGAGACGACGATGTCAACCAAGAGGACCTCGGAGGCGGAGCTC
GCCGCAAGCTTTCTAGACCAT
FMO09806.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17664-RA | 995 | CG17664-RA | 84..879 | 8..803 | 3980 | 100 | Plus |
| CG17664-RC | 1138 | CG17664-RC | 242..1022 | 23..803 | 3905 | 100 | Plus |
| CG4019-RF | 1271 | CG4019-RF | 413..588 | 177..352 | 400 | 81.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23604392..23604953 | 585..24 | 2810 | 100 | Minus |
| 2R | 25286936 | 2R | 23603838..23604057 | 803..584 | 1100 | 100 | Minus |
| 2R | 25286936 | 2R | 23608355..23608530 | 352..177 | 400 | 81.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:07:07 has no hits.
FMO09806.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:52 Download gff for
FMO09806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17664-RB | 39..846 | 1..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:19 Download gff for
FMO09806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17664-RA | 75..882 | 1..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:37 Download gff for
FMO09806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17664-RA | 75..882 | 1..807 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:37 Download gff for
FMO09806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23603834..23604056 | 585..807 | 99 | <- | Minus |
| 2R | 23604393..23604951 | 26..584 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:19 Download gff for
FMO09806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19491357..19491579 | 585..807 | 99 | <- | Minus |
| arm_2R | 19491916..19492474 | 26..584 | 100 | <- | Minus |
