FMO09807.5prime Sequence
977 bp (977 high quality bases) assembled on 2010-10-27
> FMO09807.5prime
CAGTCGACATGTCGCTTTTACGCATCAGGAAACCAAAAACCCGCAAGGGA
AAGAAGGTGTTGCTGGCCAGGGAGCCGCAACTCATTGAATCCGCCCGCAC
AATGCTGTTTTTGGACGGAAGGAAGTGCGGCGGCAATGTGAAGCTGTGCA
TGAAGGACCTGCAGGCGCTGAAGAAGCCGCTGGTTAAAGTGCTGAACCGC
AAAAACGACATTACCCCCTTTGACGATCCCTCATCTCTGGAGTTCTTGAC
CATGAAGAACGATGCTGCTTTGTTCACGTTCGGTTCCACGTCCAAGAAGC
GACCCGATAACATTATACTGGGCAGGATCTTCGAGAACGAGGTGCTGGAC
ATGTTTGAACTGGGCATCAAGCGGTATCAGGCGATTTCCGAGTTTAAGAA
CGAGAAAATCGGAGCCTGCGTCAAGCCCTGCCTGGTGTTCAATGGTCCGA
AATGGGCACAGACCGAGGAACTGAGGCGCCTTCGCAACCTGTTCATCGAC
ACCTTCCAGCGCGAGAAGGTGGATTCGATCCGGCTGCAGGGCATCGAACA
CGTTCTGAGTTTCACGGTTACCGATGACATGAACATACTGATGCGTTCCT
ACCGGATACTGCTGAAGAAATCTGGCCAGAGGACGCCGCGCATAGAGCTT
GAAGAGATCGGACCCTCGGCCGACTTCTCCATTCGCCGCACCAAGATCGC
CAGCGAGGATCTGTACAAACAGGCACGCAAACAGCCCAAGCAGTTGAAGG
TGGGCAAGAAGAAGAACATTAGCACAGACGCCCTGGGCAACACCAAGGGA
CGTGTCCATCTGGGCAAGCAGCAACGGGCTCCATTCAACGCGTCGCGTCA
AGGCGCTGCCTCGACGCCGGAGGAGAGAAGGAGAACCGACAGCGCAGATG
GTTGCTCTGAAGGCGGCCGCGCCGATGTACTGGGCTCACAAGAAACATCC
CTTCTCTAGTGCAGCTGTCTAGACCAT
FMO09807.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Non3-RA | 1093 | CG7993-RA | 98..1057 | 9..960 | 4510 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18224183..18224906 | 245..960 | 3135 | 97.8 | Plus |
| 3R | 32079331 | 3R | 18223896..18224114 | 26..244 | 1095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:07:11 has no hits.
FMO09807.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:52 Download gff for
FMO09807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7993-RA | 93..1052 | 9..960 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:21 Download gff for
FMO09807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7993-RA | 98..1057 | 9..960 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:38 Download gff for
FMO09807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Non3-RA | 98..1057 | 9..960 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:38 Download gff for
FMO09807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18223819..18223838 | 9..28 | 100 | -> | Plus |
| 3R | 18223899..18224114 | 29..244 | 100 | -> | Plus |
| 3R | 18224183..18224906 | 245..960 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:21 Download gff for
FMO09807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14049541..14049560 | 9..28 | 100 | -> | Plus |
| arm_3R | 14049621..14049836 | 29..244 | 100 | -> | Plus |
| arm_3R | 14049905..14050628 | 245..960 | 98 | | Plus |
