Clone FMO09808 Report

Search the DGRC for FMO09808

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:98
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG8501-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09808.5prime Sequence

482 bp (-89 high quality bases) assembled on 2010-10-27

> FMO09808.5prime
CAGTCGACATGGGCAGCGGATCTGAGCTTCCACTACGGATCTGTATGGTC
TGGCTGGTCGCGGGTCTGGCGATTGGCGAGGCACTCCGGTGCTACGAGTG
TGTCGATCAGGAGACGTCGTGCGGATCTGCTGATAATTCGCCGGGAAGAG
TGCGAGAATGCCCGAACTCAACCATGTGCTCGACCACCATGCTGACCACA
ATGGTGAATGGAAATGAGTGGATCAGGGTGAGGCGAGGCTGTGCCAAGCA
GGTGGATCATTACTTTGACTATATTGGAAAGCATTGGGAGCAGAAGTATC
GACTGATGGACTTACCGGAGGGCTGCAAGAAGGAGAATGGAAGGATGAAT
TGCAACTGTCGCGGAGAACTGTGCAATTCAGGAAGTCATTCGACACCAAA
TTTCCGGTTGCCGTTCGTGCTGATCTTATTGGCCCTGGTCTGCGGCAAAA
TCCTTCTTCCCGTCGCAAGCTTTCTAGACCAT

FMO09808.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG8501-RB 629 CG8501-RB 18..474 8..464 2270 99.8 Plus
CG8501-RA 1077 CG8501-RA 466..922 8..464 2270 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12383909..12384365 8..464 2270 99.8 Plus
Blast to na_te.dros performed on 2014-11-26 15:07:15 has no hits.

FMO09808.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:53 Download gff for FMO09808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 282..746 1..464 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:23 Download gff for FMO09808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 458..922 1..464 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:40 Download gff for FMO09808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 458..922 1..464 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:40 Download gff for FMO09808.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12383901..12384365 1..464 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:23 Download gff for FMO09808.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8271406..8271870 1..464 98   Plus