FMO09809.5prime Sequence
1141 bp (993 high quality bases) assembled on 2010-10-27
> FMO09809.5prime
CAGTCGACATGGCCGAAATCTTGGCACGCTTGACGCGTGTTTCGGAAAAC
TACCTCCAAGAACTGGAGGAGGAGCCGGAGCCACAAGGACCGCCCAAACT
AACCAAGGCTCAGAAGAAGGCCGCCAAGAAAGAGGCCAAGCGACTGGCTA
TGATCGAGGAGAAGCGGCTCATCATGCGGGATGCCCTGATGCGCGAGCTG
GAGATGGGCAAGCATATGGAGGAGAAAGGCAACGAGGAGTGGCACGAGAT
GTGCCGCGAAATCAAGATCAAGGAGCTAAACGAGGAGATGAGGGCTTGGG
GCGAGCGCTCGGAACGTAACATTCAGGCCAAGAACGACCACATCAAGATG
CTTCTGGACGACATGGCGCAGACGCAGGATCAGCACGTGCGTTGCTACAG
CAAAACGGTGGAGCTGATTGATCACATTCGCGACTGCTTCCACGTGATGT
TGGGCGGGGTGAAGAGCATGTATGACCAGCAGGCTGACGAGATGCTGAGG
GATTACTATGAAGAGGTGCGCCGGCGCACCGAAGAGGTGGAAGCCATGAA
AACGAACTCCGAGAACATAATCCATGCCACCAACATCACCACCCGGGATC
AGCTGAAGGAGGATTACACTATCTACCTGGAGCAGCGCGACGATCGCGTG
AATACGGAGATTGAGAACAGATTTAAGATTCGAGATCAGATTGTCCGCCG
GATGACGCACATGCAGCAGCAACTGAACGACTTCGTGGAGTCGCTGAGGA
GCACCGAACTGGATGCCCACAAGTACGAGAAGATCCACTGGCTGACGGAG
CGGCAGGCGGCTTTCATGGAGGAGTCACGCAAGCTAAACGCCGAGGAGTC
CAAGCACATCAACATGCAGGCGGAACTGCAGCGCGAAATGGTTCGCATGG
ATGCGGAGAACAACTCCACGCTCAACGATCTTCGCCTGGAGTTCAGTACT
TCACCAACGTGCGCAAGAAGATTGATGTCACCAGGAGAATGGATCGCGCG
ATCACGCACGAGAAGTTGCGCATCCTGACCGGCGAGTGCTACTAGTTGAC
AAGCAAATGGAGAAGCACGTGAAAAGTGGGGAAATTACTCTTGGCTGTCG
ATCACTGCATGGAACTGCTACGATCGGAAGTATCCTCGCGG
FMO09809.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10510-RA | 1732 | CG10510-RA | 91..1204 | 9..1118 | 5285 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21208802..21209674 | 1050..179 | 4150 | 98.6 | Minus |
| 3L | 28110227 | 3L | 21209823..21209994 | 180..9 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:07:19 has no hits.
FMO09809.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:54 Download gff for
FMO09809.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10510-RA | 84..1204 | 1..1118 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:26 Download gff for
FMO09809.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10510-RA | 84..1204 | 1..1118 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:41 Download gff for
FMO09809.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10510-RA | 84..1204 | 1..1118 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:41 Download gff for
FMO09809.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21208798..21209673 | 180..1053 | 98 | <- | Minus |
| 3L | 21209824..21210001 | 1..179 | 97 | | Minus |
| 3L | 21208676..21208742 | 1054..1118 | 91 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:26 Download gff for
FMO09809.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21201776..21201842 | 1054..1118 | 91 | <- | Minus |
| arm_3L | 21201898..21202773 | 180..1053 | 98 | <- | Minus |
| arm_3L | 21202924..21203101 | 1..179 | 97 | | Minus |
