FMO09811.5prime Sequence
605 bp (605 high quality bases) assembled on 2010-10-27
> FMO09811.5prime
CAGTCGACATGTTTCGTAGCTTGGTGAATATTACAAGCAAATACAAAGTC
CTACGCGGCATGATATCGTATGGCACCCTCTGGCCCTGCGGCTCCCTCAT
CGAGCAGACCATGATCGAGAAGAAGACATTCCGGACGTACGACTGGATGA
AGTGCCTTAGGTTCAGCTTATTCGGCTTCTTCTTTATGGGGCCCACCATA
TATGTGTGGATCAGATTGGCCAGCGTTATGTGGCCGCGCACCGACATTAA
GTCATCGCTCTGCAAGGCGATCACCGAGCAGACCGCTTATGATCCGATGG
CCATCAGCTCGTTCCTCTTCTTCATGACCTTGATGGAGGGCAACTCGTAC
GCGGAGGCCAAGCGGGAGGTCAACGATAAATTCCTGGACGCCTACAAGGT
GGGCGTTATTTATTGGCCCTGCGTGCAGACGGTGAACTTTGCCTTTGTTC
CGGCGCGAAACCAGGTCGTGTTTACCTCCTTCTTCAGCATGTGCTGGACC
ACCTTCCTGGCCTACGTCAAGTTCCTGCAGCTGCACCCTCCCGTCGATGT
GGACCACCACGCCCTGGACATCCACTTCCTGGAGATGGCAAGCTTTCTAG
ACCAT
FMO09811.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:06:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2022-RB | 902 | CG2022-RB | 156..734 | 9..587 | 2865 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:06:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4986668..4986888 | 587..367 | 1075 | 99.1 | Minus |
| 3R | 32079331 | 3R | 4988249..4988460 | 370..159 | 1060 | 100 | Minus |
| 3R | 32079331 | 3R | 4988536..4988689 | 162..9 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:06:44 has no hits.
FMO09811.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:48 Download gff for
FMO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2022-RA | 147..741 | 1..594 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:09 Download gff for
FMO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2022-RB | 147..741 | 1..594 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:28 Download gff for
FMO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2022-RB | 147..741 | 1..594 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:28 Download gff for
FMO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4986661..4986886 | 369..594 | 97 | <- | Minus |
| 3R | 4988251..4988458 | 161..368 | 100 | <- | Minus |
| 3R | 4988538..4988697 | 1..160 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:09 Download gff for
FMO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 812383..812608 | 369..594 | 97 | <- | Minus |
| arm_3R | 813973..814180 | 161..368 | 100 | <- | Minus |
| arm_3R | 814260..814419 | 1..160 | 97 | | Minus |
