FMO09820.5prime Sequence
906 bp (906 high quality bases) assembled on 2010-10-27
> FMO09820.5prime
CAGTCGACATGCTAGCCTGCAAGCTTCTTCTCGCGTTGGTCATGGGAATG
CACTGCATTCAATTGTTGATGGCGGCCTGCGTGTGCTCCGAAAAGGGAAC
GGACTACTGCCAAAGCTGTCAGGGATCCACGGTCATCCGGCCGAAGCCCC
GATACTACGAGCCCAGTGACGTTAACCTGCCGCCGATCGGAGACAACTGC
TGGTGCAGCAAGCAGCTGATCGAACCCGCCCAACTGCCCAAGACCTGCGG
AAAAACCACGCCATGCAAGCCCACCTGTTCGTGCCAGCAGATCAGCTCCG
ACAGCAGCTACGCCTCCTCTTCCAGCTCAGGATCCGTGTACGGAAAAATC
GACTATGCCGCAGAGAAGATAGTGGACAACAGTCCAGCTGCGGATCCCAT
CAGCGTGAGTCTGGCCGCCCAGGCTGGAAAGGCCATCAATGTGCCGGAGG
CCAAGTTGGCCTACGGATTTGCCCAGAAGCCCGTCGATGGTGAGAAAAAG
GTGGTGTTCTCCAACGTGCCCGAGGAGAATCTCTTCAAGCTGAAGAGCGA
CGTGATCACGCTGAAGAAGCGCACCTATGCGACCAAGCAGGAGGATGAGG
AGGAGTACGCCGAGGAGGAGCAGGAGCAGGAACAGTCCTCCGATGATGAG
GAGGCACCGCAACTCACCTACAAACAGCTGGGCTACATCACCGAGCAATA
CAAGAACCCCAAGTTCAGGAAGATCAGCAGTTCCAGCTCCAGTTATGCGT
AGAAGGACTACAAGGATTCCAGCGAGAGCGGCTACGGTAAAGTGGCCGGC
AAGGTGTCCGTGGACTGTGGCTTCAAGCCCGGCCGGATCACCTCGTACCG
GAAGTCAAAACGAGAGGCGGTCCGACGACTGTTACTACGCAAGCTTTCTA
GACCAT
FMO09820.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp7Fa-RA | 1033 | CG33962-RA | 31..911 | 7..888 | 4340 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8472425..8472965 | 347..888 | 2615 | 99.3 | Plus |
| X | 23542271 | X | 8471382..8471571 | 65..254 | 950 | 100 | Plus |
| X | 23542271 | X | 8472264..8472355 | 255..346 | 460 | 100 | Plus |
| X | 23542271 | X | 8470918..8470976 | 7..65 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:04:52 has no hits.
FMO09820.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:30 Download gff for
FMO09820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fa-RA | 24..915 | 1..892 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:52:16 Download gff for
FMO09820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fa-RA | 24..915 | 1..892 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:40 Download gff for
FMO09820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fa-RA | 24..915 | 1..892 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:40 Download gff for
FMO09820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8470911..8470976 | 1..65 | 93 | -> | Plus |
| X | 8471383..8471571 | 66..254 | 100 | -> | Plus |
| X | 8472264..8472355 | 255..346 | 100 | -> | Plus |
| X | 8472425..8472969 | 347..892 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:52:16 Download gff for
FMO09820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8364944..8365009 | 1..65 | 93 | -> | Plus |
| arm_X | 8365416..8365604 | 66..254 | 100 | -> | Plus |
| arm_X | 8366297..8366388 | 255..346 | 100 | -> | Plus |
| arm_X | 8366458..8367002 | 347..892 | 98 | | Plus |
