FMO09822.5prime Sequence
338 bp (338 high quality bases) assembled on 2010-10-27
> FMO09822.5prime
CAGTCGACATGCGTTCATCTACCGTGCTACTTGCGGCAATCGCCGTTCTC
TTAGTTTCGGGCTACGAAGCTGCCGTTGTCCGAGGCGTCTTCGAGGATCC
AACCCATCCTGGAAAGTGTGTTCTCGAGGGTTTGGTTCTTGAAAAAGGTC
AAAGTGCACGCCACCCACAGAGGTGTGAGCGAATCATATGCGGAGAAAAT
AGTGCGGCAGAAATCCAATCATGTGGTGCCTATGGACTTCCCCCCGGCAA
AAAGTTTGGAAAGTACACAAACCCAAACGCAGATTACCCTGATTGCTGTA
ATCGTGAGATTATCAACCAGGCAAGCTTTCTAGACCAT
FMO09822.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34215-RA | 444 | CG34215-RA | 32..343 | 9..320 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6831551..6831762 | 220..9 | 1060 | 100 | Minus |
2R | 25286936 | 2R | 6831397..6831496 | 320..221 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:07:23 has no hits.
FMO09822.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:54 Download gff for
FMO09822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34215-RA | 30..346 | 9..328 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:27 Download gff for
FMO09822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34215-RA | 32..348 | 9..328 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:42 Download gff for
FMO09822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34215-RA | 32..348 | 9..328 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:42 Download gff for
FMO09822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6831392..6831496 | 221..328 | 96 | <- | Minus |
2R | 6831551..6831762 | 9..220 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:27 Download gff for
FMO09822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2719056..2719267 | 9..220 | 100 | | Minus |
arm_2R | 2718897..2719001 | 221..328 | 96 | <- | Minus |