Clone FMO09822 Report

Search the DGRC for FMO09822

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:98
Well:22
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34215-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09822.5prime Sequence

338 bp (338 high quality bases) assembled on 2010-10-27

> FMO09822.5prime
CAGTCGACATGCGTTCATCTACCGTGCTACTTGCGGCAATCGCCGTTCTC
TTAGTTTCGGGCTACGAAGCTGCCGTTGTCCGAGGCGTCTTCGAGGATCC
AACCCATCCTGGAAAGTGTGTTCTCGAGGGTTTGGTTCTTGAAAAAGGTC
AAAGTGCACGCCACCCACAGAGGTGTGAGCGAATCATATGCGGAGAAAAT
AGTGCGGCAGAAATCCAATCATGTGGTGCCTATGGACTTCCCCCCGGCAA
AAAGTTTGGAAAGTACACAAACCCAAACGCAGATTACCCTGATTGCTGTA
ATCGTGAGATTATCAACCAGGCAAGCTTTCTAGACCAT

FMO09822.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG34215-RA 444 CG34215-RA 32..343 9..320 1560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6831551..6831762 220..9 1060 100 Minus
2R 25286936 2R 6831397..6831496 320..221 500 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:07:23 has no hits.

FMO09822.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:54 Download gff for FMO09822.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 30..346 9..328 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:27 Download gff for FMO09822.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 32..348 9..328 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:42 Download gff for FMO09822.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 32..348 9..328 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:42 Download gff for FMO09822.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 6831392..6831496 221..328 96 <- Minus
2R 6831551..6831762 9..220 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:27 Download gff for FMO09822.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2719056..2719267 9..220 100   Minus
arm_2R 2718897..2719001 221..328 96 <- Minus