FMO09824.5prime Sequence
1043 bp (874 high quality bases) assembled on 2010-10-27
> FMO09824.5prime
CAGTCGACATGACGGAACGACAGCCGTTGCTCCTCCAGAGCGATGCCTCT
GACTACGAGGGCAGTCGAGGATCGGCAGCACGACCCGTGCGCAGCTCTCC
GCCGGACAACACTCTCGTCAACGTGCACAGCGAGGACAGCTTACCACCCT
CTGGATCGGGAGATGATGAAATTGGATCGACGGATAAGTCCTATAACCCC
ACCCATCATCGCGACCTGAAGCATCCGACGTCCAACTTCGATACCCTGGT
TCATCTGCTGAAGGGCAACATTGGTACGGGCATTCTGGCAATGCCGGATG
CCTTTAAGAACGCCGGACTTTATGTGGGACTCTTTGGCACAATGATCATG
GGAGCCATCTGCACCCACTGCATGCACATGCTGGTCAACTGCTCCCACGA
GCTGTGCCGGAGATTCCAGCAGCCATCGTTAGATTTCTCGGAGGTGGCAT
ACTGCAGTTTTGAGTCGGGACCTTTGGGACTAAGACAATACTCCATGTTG
GCTCGACGAATTGTTACCACGTTCTTGTTTATCACGCAAATCGGTTTCTG
CTGCGTCTACTTCCTCTTTGTGGCGTTGAATATCAAGGACGTTATGGATC
ACTACTACAAGATGCCTGTGCAGATTTACCTGCTTATAATGCTTGGACCC
ATGATCCTGTTGAATCTGGTGCGGAATCTGAAGTATTTGACACCCGTTTC
GCTGGTTGCCGCCCTGCTCACAGTTGCCGGACTGGCCATTACATTCTCGT
ACATGCTGGTGGATCTGCCGGATGTGCACACGGTCAAGCCGGTGGCCACT
TGGGCGACGTTGCCTCTATATTTTGGAACCGCCATCTACGCGTTCGAGGG
AATTGGTGTTCGTCCTGCCCTTGCAGATTATATGCGCACACCCGAGGACT
TTGGCGCATCACAGTTGTCATCAACTCGGGCATGGTGATCGTGGCCTGCA
TAGTACAACAGCTGTCGGTGTCTTACGCTACCTGAAGTACAGGCGAATCA
GTGGATGGCACCCATACCCTTAGATCTGCCTCTAAGGCGACAC
FMO09824.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13384-RL | 2226 | CG13384-RL | 109..1139 | 9..1043 | 4580 | 96.7 | Plus |
| CG13384-RK | 2484 | CG13384-RK | 367..1397 | 9..1043 | 4580 | 96.7 | Plus |
| CG13384-RC | 2430 | CG13384-RC | 313..1343 | 9..1043 | 4580 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8386487..8387328 | 148..990 | 3750 | 97.6 | Plus |
| 2L | 23513712 | 2L | 8386247..8386381 | 9..143 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:07:31 has no hits.
FMO09824.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:55 Download gff for
FMO09824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13384-RC | 301..1300 | 9..1010 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:31 Download gff for
FMO09824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13384-RC | 313..1312 | 9..1010 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:45 Download gff for
FMO09824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13384-RC | 313..1312 | 9..1010 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:45 Download gff for
FMO09824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8386247..8386385 | 9..147 | 98 | -> | Plus |
| 2L | 8386487..8387347 | 148..1010 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:31 Download gff for
FMO09824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8386247..8386385 | 9..147 | 98 | -> | Plus |
| arm_2L | 8386487..8387347 | 148..1010 | 97 | | Plus |
