FMO09828.5prime Sequence
1011 bp (975 high quality bases) assembled on 2010-10-27
> FMO09828.5prime
CAGTCGACATGGGTTCATGCCTTGGCAGCTGTGCCACAGCTGCCGCCGCA
CCAGCCCACTCCGCCTGCACCTCAACGTCCGACTCCACCACCCACTCGAC
TTCCTCGACGTCGTCTTCACTGACAACTCCCCCCACGTCCTGGGTGGCCA
ACAGCTGGCTCTGGCGAAAGAACAGATCTGCAGGAAGACAAGATCCAGAG
GCAGATCTCTTATCGAGGACCACCAGGCAGCGCTGCCAACGGAACGGATT
CATCTACCGCATCCTGCGGCTCAAGAAAAGGCAGCAGTGTCCCAGCTTCC
TGGACAAGTACTGGGAGCAGCAGCCCAGCTACGCCAAGCTGCCGACCACC
GCCATGGCGGACATTCAAATGCAGAACCTGGACGCCGGCAAGTTGCTCAA
CGCCCAGACCACGCCCAGTCGGGAGACGGAGATGGGACTTGGAGCCTACC
AGCGCATGGCCAACTCGCGGGCCAGCTCCTCCTTGGATCTCGAGTGGGAA
CACGAGTACTCACAGCTGCGGCAGTATCAGTACCAGTGCCAGCAGGTGCC
CAAGGAGCTGCCACCAACGCCACCAAAGCCGCGCTACGCATCCTTAGACC
AGCTGGCGGCAGCCAATGCGATGGCCACCAGCCAAGGACGACACATGGCG
CGCCAAGCCAGACTGAGTTGCCAGCGCCACGGAGGTTCGCTCACGCGGAA
CTCGTGCTGTTCGTCTACGCAAAACTCCTGGTCGCACATATCCACGCCAG
AGTCGCTGGAATGGGACGTGGACGAGGAGCGAGAGCAGCAGCGTCAGCTT
CGTCTGGAGGATGACAATCTGGATGATAGAACGCTCAAGTTGCTGCATCA
GATCGAGCAATTGAAGCACCATGTACTGCAGGAGACTGGCGATGGACTCA
GCATGGAATCAGCTGCGGTCGAGGAGCTCACCGAGGGCCTTCAGTTCTGG
GCAACGCACTCGCTGGCGACTCCCAGCTGGAAGACATGTAAGTGCAAGCT
TTCTTGACCAT
FMO09828.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:05:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13982-RB | 1726 | CG13982-RB | 389..1376 | 8..993 | 4845 | 99.5 | Plus |
| CG13982-RA | 2643 | CG13982-RA | 389..1376 | 8..993 | 4845 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6413423..6414055 | 350..981 | 3100 | 99.7 | Plus |
| 2L | 23513712 | 2L | 6413180..6413366 | 163..349 | 935 | 100 | Plus |
| 2L | 23513712 | 2L | 6412703..6412859 | 8..164 | 785 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4160..4230 | 513..584 | 123 | 65.3 | Plus |
FMO09828.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:35 Download gff for
FMO09828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 382..1376 | 1..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:52:26 Download gff for
FMO09828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 382..1376 | 1..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:52 Download gff for
FMO09828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 382..1376 | 1..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:52 Download gff for
FMO09828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6412696..6412858 | 1..163 | 97 | -> | Plus |
| 2L | 6413181..6413366 | 164..349 | 100 | -> | Plus |
| 2L | 6413423..6414068 | 350..993 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:52:26 Download gff for
FMO09828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6412696..6412858 | 1..163 | 97 | -> | Plus |
| arm_2L | 6413181..6413366 | 164..349 | 100 | -> | Plus |
| arm_2L | 6413423..6414068 | 350..993 | 99 | | Plus |
