FMO09833.5prime Sequence
864 bp (864 high quality bases) assembled on 2010-10-27
> FMO09833.5prime
CAGTCGACATGAATCTTATACTGGCTTTAACCACGGCTCTGCACCTAGTT
TTGGTGGTATTGGCGCACAATCCGCTATCAACTCGTGGCGAAAGCCTTTC
TGATGGCATACGTCTGGTCATGGAAAAGAGGTCGGGCGATGTGGTACACA
TTCGTCCAGCTCGGGGCACACTGGAGGCCGAAACAGTCGCATCCACAACA
AATAGTGACACCCACCGCACCAGGAACAATCGTAAGCCGAACAAGCCTCA
AGAGCACTCTCAGCAGGTTGGGGCCCACAAGTCGGGATCTAGAAAACTAG
TGGTTGCGGAAAATGGCGGGGCACTGTCATCACAACTACCACAACCAAAT
CACAAGCAAGGCCACAAGAACACTGATAAGCAACAACGAGGAGGGGGATC
CAAGCAGCAGCGAGGACATAGCCAACATCATGGAGGAAATAGGAAAGGGC
CTAAGGCAGCGACTCCAGAGAATGGATCGACTTGCCGATACGCAAAGAGC
GCTTGGTCCAATTGTGATCACAAGACCAACATGCGTTCACGAGTCCTGTC
CCTAAGGAAAGGAGAGCAAAACTGCTTGCCCACGCGGACCATACAAAAGA
AGTGCAAGAAAGGCTGCCGCTATGAAAAGGGTGAATGGTCTCAATGCGTC
GGAGGACAAATAACCAGAGAGGATAAGTTGGAACCAGAGGCAACTGGCGG
TAGTGATCAAAACTGCAATCCTGTGCGTACCGTCAGCAAGAAGTGTAAAG
CAAATGGCAATTCCAGTCGGAGGAAAACAACACGGCCAGAGTCGTCGAAC
AAAAGAGCAAAAGCAAAAGGATAAAGGAGCCAGTCACATTTCGTCTGCAA
GCTTTCTAGACCAT
FMO09833.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:05:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| miple2-RG | 1292 | CG18321-RG | 324..1160 | 9..846 | 4150 | 99.8 | Plus |
| miple2-RF | 1031 | CG18321-RF | 63..899 | 9..846 | 4150 | 99.8 | Plus |
| miple2-RA | 1138 | CG18321-RA | 170..1006 | 9..846 | 4150 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:05:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 273565..274031 | 9..475 | 2335 | 100 | Plus |
| 3L | 28110227 | 3L | 274593..274805 | 611..824 | 1020 | 99.5 | Plus |
| 3L | 28110227 | 3L | 274103..274242 | 474..613 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:05:41 has no hits.
FMO09833.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:38 Download gff for
FMO09833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| miple2-RA | 168..1004 | 9..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:52:37 Download gff for
FMO09833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| miple2-RA | 170..1006 | 9..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:00 Download gff for
FMO09833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| miple2-RA | 170..1006 | 9..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:00 Download gff for
FMO09833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 273565..274030 | 9..474 | 100 | -> | Plus |
| 3L | 274104..274241 | 475..612 | 100 | -> | Plus |
| 3L | 274595..274807 | 613..826 | 99 | -> | Plus |
| 3L | 274867..274886 | 827..846 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:52:37 Download gff for
FMO09833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 273565..274030 | 9..474 | 100 | -> | Plus |
| arm_3L | 274104..274241 | 475..612 | 100 | -> | Plus |
| arm_3L | 274595..274807 | 613..826 | 99 | -> | Plus |
| arm_3L | 274867..274886 | 827..846 | 100 | | Plus |
