FMO09838.5prime Sequence
878 bp (878 high quality bases) assembled on 2010-10-27
> FMO09838.5prime
CAGTCGACATGTTGCAGCGCGTGTCGCGTAGATTTCCCTCCTTAAGGCGA
TGCGGCCTGCGAACGGCATCCACTGTGCCCACAAATCAGGCGCAGCCGGG
CGAGGTAGAGGAGGAGGTCAGTGCGACGGTGAAGAGAATCCGCTCGGAAT
TGGCAGCGGATAAGCAGAAACTTAAGTGGCGCACTCCGATTGGCGACCGG
CCGGAGGATTGGAACAGCAAACTGAAGCTGTTCTCCAATGCGGAGCAAAC
CTCAGACTTCATCGTGATGATGCAGAAGCCCATCGATCTAAGTCCGCGGA
ACATTCGACAGTGGTGGGAGAACCGGGAGGAGCGTATTGAGCGGCACATG
CAGCAGTTTGTCCCGGAAAGGCACAAGATTCTGGGCGCCGAATTGGCTGC
GGCGCATTTCATACTGTACCGCGGCGGGGCCGTCAAGTTCATCAACGATA
CCCACTGGCGCCGGGCCTCCAAAGATGGCGAGTTCAAACTGCCTAATAAG
TTTGATCCTCGCTATAAAGTGGAGGCCTTGAGGTGTGATAACATGGAACT
TTACTACGAGGGGCTGGAGAACCTGCGCTGCCTGGACTCCCTTAAGTTCC
TGTCCTTTCACAATGTGAAAAGCTTTGATGACTGGTGTCTGGATAGGATT
TCGGGAGGTGGCTTCCCTAACCTGGAAGTGCTCGACCTCTCGTGCACTCA
AATCACCAGCAATGGATTGGCCTGTCTGTATCGTTTTCCTAAACTTAAAT
TACTGATTTTGAATGATCCAAAGGAGACCCTAGAACTGGAATTGTCCACG
GTCATGTTAGAGGAGGCCATGCCCGCTTTAAAAATTGTTGGCGCCGACGC
TATTCACAGCGCAAGCTTTCTAGACCAT
FMO09838.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:05:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4042-RB | 990 | CG4042-RB | 76..927 | 9..860 | 4260 | 100 | Plus |
| CG4042-RA | 951 | CG4042-RA | 37..888 | 9..860 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:05:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20770206..20771057 | 860..9 | 4260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:05:57 has no hits.
FMO09838.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:41 Download gff for
FMO09838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4042-RA | 57..922 | 1..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:52:46 Download gff for
FMO09838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4042-RA | 27..892 | 1..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:07 Download gff for
FMO09838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4042-RA | 27..892 | 1..865 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:07 Download gff for
FMO09838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20770202..20771067 | 1..865 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:52:46 Download gff for
FMO09838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20763302..20764167 | 1..865 | 99 | | Minus |
