FMO09841.5prime Sequence
1073 bp (820 high quality bases) assembled on 2010-10-27
> FMO09841.5prime
CAGTCGACATGGAGAATCGCTTATTAGTTATATGGCTGCTTCTTGCCATC
GCCACGGCATTGGTTAAGGCCGAACTTACAGATATATCCGCTATCTGCAG
GATATCCGATCCCTGGCAAATGCTGCCCCACAAAGACCACTGCCAAAGGT
TCTATGTTTGCACTGGCGACGATGACATGCCCTTCCAGGAGTTCAACTGT
CCGGCGGAGTACCATTTTAGCAAGAAGCTCATGATTTGTGTACCCGGAGC
CTGCACCGATGAATCCGTATTTTGTGGACTTACTAATAGTGTGGAGCGAG
TCCAAAGCGATTGCACGCGATACCGACAATGCCTGGAGGGAGGATCCTTC
GCCGTGGCCAAATGTTCCGTCGGAAACTACTTTGATCCATCCCGAAGAGC
CTGCCTCCCAGTGGCCATAAGTGCGGCCCATCACTGCAGCTGTGTGCTGC
CGGATAATGCCACCCTGGCGAATCCGAGCGACTGCGAGACATATTTCCGC
TGTCACTCCGGACAAGCGGAGCTGGTCCAATGTCCATCAGGAGACTACTT
TGACGAACGAGTGAGCAGCTGTGTGCCGGATCACACGGGAATTTGCCTGG
AAAAGCCCACAATGCCGCCGACACTCACAGAGCAAGCTCTTGCCATGGAC
GAGTGCATCCGGACGGGCAGCCGCCTGGCACCGCACAGCCGAGATTGCCA
ACGTTACTACATATGCGCCAAAAAGAGGGTGCTGGAAATGCGCTGTCCGA
GGGGTCAGTATTTTGACGTTGTACGGCGCTACTGCGCTCTTGATCTGGGA
AGCGAATGCCAGGCTCTGCAGGCCGAGAAACAAGACCTGCAGCTGGAGGA
GAATATTCAGGTAGAGCTGGAAAAGAATATCCAGACGGACATTCCAGCGA
AACATAAGTAAAGAATCATGACACAAGCCGGTTCAGAAGACTCCGAAAGG
AAGTGGTCCGCGACCAGTATTACACTGCCGCAGCTAATGACAAACTTCCA
CAGTCCTCAGCCGAGTAGCGAACAGCTACGATAGTCTTCGTCGAGTTCAT
TTCTATGCAAGCTTTCTAAAACA
FMO09841.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:06:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-J-RA | 1235 | CG7348-RA | 48..1106 | 9..1057 | 4805 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:06:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20130625..20131631 | 1015..16 | 4525 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:06:08 has no hits.
FMO09841.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:43 Download gff for
FMO09841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-J-RA | 33..1103 | 1..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:52:52 Download gff for
FMO09841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-J-RA | 39..1109 | 1..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:12 Download gff for
FMO09841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-J-RA | 39..1109 | 1..1060 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:12 Download gff for
FMO09841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20130577..20131633 | 13..1060 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:52:52 Download gff for
FMO09841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20123677..20124733 | 13..1060 | 97 | | Minus |
