FMO09849.5prime Sequence
959 bp (959 high quality bases) assembled on 2010-10-27
> FMO09849.5prime
CAGTCGACATGGCGAACACCCTGAGAACTCTCGACCCAAAGTTGGCGGCT
CTGGCCAAAAGTGAGTGCAACGAGGAGCAGGCGCAGCGAGCGGAGATTAT
TGCCACCATTAAGACATGGATCACCAAGTCGCCGCACCTTAAGGCGCCCA
CGGATGAGCAGCTTATCCTGGCCTTTCTGCGGCGTTGCCGTTTCAGCCAG
GAGGAGACCAAACGGCGATTCGACAACTACTACTCCCTGCGCAGCGTGTT
CCCGGAGGTTCTGGGATCCCGACAGGTGGACGAGGCCCTGCTCACCCAGT
TGCAACGCGGAATCCATGTGATACCCATGCGACCTGTGAGTCCCGAGGGG
CCAAGGGTTATCATCTCGCAGTTCCGAAACATCGATCCCAAGAAATCGAA
TCCCCGCGAAGCCTTCAAACTGATCTTCATAATGTTGGAACTATTGGCTT
TGGAGTGCGATAATGCCGCGATTTCCGGCTTGATCTGGGTTGTGGATGCC
AGAGATGTTACCATGGAGCAGATGATGCAGTACGATCCCTTCCTGCTGAA
GAAGGCATTTGCTCTGGTGGACCAATGCATACCACTGCGATTTGTTGAGA
TTCATATGATCAATATGCGCAAGGAGGGACAAACCATATTCAATTTTGTA
ACGAAGTTTTTGCCCTCCAAACTGCCTTTCAAGTTCGTGGTCCACAAAAA
GTCGGAGGATCTGTACCAGCACCTGCCCAGAGATGTGATGACCATCGAGT
ATGGTGGCACCAATGGCTATCAGGCAGAGGCAGTGGATCATTGGCGCCAG
AAGCTGCTGGACAGCAAGGATTATCTGGCCAAGGATGCCCAGTATGGTAC
TAATGAGAAACTGCGCGTCGGATTGGCCAGTGCCTGGGCCAATGGAGAAC
TGGACGGGATGAGCGGTTCTTCCGCAAATTGGAGCTAGATGCAAGCTTTC
TAGAACCAT
FMO09849.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:06:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10300-RA | 1484 | CG10300-RA | 32..964 | 9..940 | 4640 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:06:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23712093..23712466 | 310..683 | 1870 | 100 | Plus |
3R | 32079331 | 3R | 23711558..23711859 | 9..310 | 1510 | 100 | Plus |
3R | 32079331 | 3R | 23712534..23712793 | 682..940 | 1250 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:06:32 has no hits.
FMO09849.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:46 Download gff for
FMO09849.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10300-RA | 23..966 | 1..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:04 Download gff for
FMO09849.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10300-RA | 25..968 | 1..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:24 Download gff for
FMO09849.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10300-RA | 25..968 | 1..945 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:24 Download gff for
FMO09849.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23711551..23711859 | 1..310 | 98 | -> | Plus |
3R | 23712094..23712466 | 311..683 | 100 | -> | Plus |
3R | 23712536..23712797 | 684..945 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:04 Download gff for
FMO09849.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19537273..19537581 | 1..310 | 98 | -> | Plus |
arm_3R | 19537816..19538188 | 311..683 | 100 | -> | Plus |
arm_3R | 19538258..19538519 | 684..945 | 98 | | Plus |