FMO09855.5prime Sequence
1132 bp (995 high quality bases) assembled on 2010-10-27
> FMO09855.5prime
CAGTCGACATGTCATGTATTCGGCTAGCGTCTGCCACCGTTCTGGCAGGG
GTCCGTCCCCCGCCGGCAGCAAGCGGAGGTGGAGCCTTGCGCCTGTTGAC
TAAACGGAATCCGGATGCTGCATTCGCACGCCGCCAGTTTGCTGTAGCGG
TTGAAAACGGCGGAGGCAGAAAGAAGCCGAATGGAACTTTCAAGCTCGCA
GTTTTGGGGGCCACCGTAGGCGCGGCCACCGGATCGGTGTATACGATGTA
CCAGCGGTGGACAGACGGCAGCTCGCACAAAGAGCACGAGGAGACGAAGC
CGACGCGGCTGGACGGGATTCCGGCTGGAGTGCGGATAACCAAGCGCTAT
GTCAACCCCAAGGACACGTCCGGTTTGGACATTGTGCTGTTCCAGTTCCA
GACGTGTCCCTTCTGTTGCAAGGTGCGCGCTTTCCTCGACTACATGGGCA
TATCCTATGCGGTGGTCGAAGTGGATGCCGTCCTACGGCAGGACATCCGC
TGGTCGTCGGTGAAGAAGGTGCCGATGGTGCTCATCCGACAGCAGGACGG
CAAATACGTCCAGATGGTGGACTCAAGTGCCATCATATCCCTTATAGCCA
CCCACCTGCAGGACAAGCGCACCGACATCGGCGAGCTGGCACAGTTCTAT
CCGCACACCTCCTTCTTCGACGATGATGGCAAAAAGAAGAACGACATATT
GAATAAATACTTCCTCATGTACCGCGAGCATACGCCCAAGGGAGTATCCA
AGGAAACGGATGAAACCGATCGCAAGTGGAGAAGCTGGGCCGACAGCCAC
TTGGTGCATCTAATATCGCCCAACTGTTATCAGACCATGGGCGAGTCCCT
AGAGACTTTTGAGTGGTTCTCGCAAGCTGGCGAGTGGACGTTCACTTCCC
CAAATGGGAGCGCGACCTGATGGTTTACTGTGGTGCCCCGCCATGTGGGC
CATAGCCAAGATGCTGAAGCGTCGTCACGCCCTCAACGACGACGTCATGT
CGCACATGCCGAATGCCCTTGACAACGGACCCTGGCTGAAAAAGATGAAC
ACGAAATTCATGGCCGAAACACCAGTCTGACTGATCTATCGTTCCGCGTG
CCTTCAGCCATGGAGGGTGTCGAGTCAGCATT
FMO09855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(P)-RA | 1412 | CG4086-RA | 83..1203 | 9..1117 | 5095 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16611363..16612117 | 763..9 | 3775 | 100 | Minus |
| 3L | 28110227 | 3L | 16610994..16611298 | 1063..764 | 1125 | 95.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:07:42 has no hits.
FMO09855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:57 Download gff for
FMO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(P)-RA | 81..1185 | 9..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:36 Download gff for
FMO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(P)-RA | 83..1187 | 9..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:49 Download gff for
FMO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(P)-RA | 83..1187 | 9..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:49 Download gff for
FMO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16610949..16611298 | 764..1101 | 93 | <- | Minus |
| 3L | 16611363..16612117 | 9..763 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:36 Download gff for
FMO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16604049..16604398 | 764..1101 | 93 | <- | Minus |
| arm_3L | 16604463..16605217 | 9..763 | 100 | | Minus |
