FMO09856.5prime Sequence
560 bp (560 high quality bases) assembled on 2010-10-27
> FMO09856.5prime
CAGTCGACATGTCCGTGCGCCACGACTGGTACCAGTCGGAGACCAAGGTG
GTCATCACCGTGCTCCTGAAGAACGCCGTCGATAAGAACTATGCTGTGGA
GATTACCCAGAAGCGAGTCCACATGACGGCGGATGGCTACGAGTTGGACC
TGAAGCTGCTTCATCCCATTGTTGTGGAGCGTTCCTCCTACAAGGCCTTT
TCGACCAAAGTGGAAATCACACTGGCTAAGGAGACGGGAATTCGGTGGGA
GAATCTGGAGGAGGCCATCGTGGCTGCACCGGTGAAACCCAAGGCCAAGA
ACTGGGACCAGCTGGTCAGCGAGGAGGAAAAGATCGACGAGAAGGAGGCC
AAGGGCGAGGCGGCCCTCACCAACCTGTTCAAGAAAATCTACAGCTCATC
CTCGCCCGAGGTCCAAAAGGCCATGAACAAGTCCTTCTCGGAGTCCGGAG
GCACCGTGCTCAGCACCAACTGGAATGAGGTGGGCAAAGAAAGAGTCACC
GTGAAGCCTCCAAATGGAACCGAGTTCCGCGAGTGGGAGAAGGCAAGCTT
TCTAGACCAT
FMO09856.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sgt1-RA | 1085 | CG9617-RA | 153..686 | 9..542 | 2670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8304589..8305122 | 542..9 | 2670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:07:46 has no hits.
FMO09856.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:58 Download gff for
FMO09856.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9617-RA | 130..675 | 1..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:38 Download gff for
FMO09856.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgt1-RA | 146..691 | 1..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:51 Download gff for
FMO09856.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgt1-RA | 146..691 | 1..548 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:51 Download gff for
FMO09856.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8304584..8305129 | 1..548 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:38 Download gff for
FMO09856.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4130306..4130851 | 1..548 | 98 | | Minus |