FMO09858.5prime Sequence
1108 bp (904 high quality bases) assembled on 2010-10-27
> FMO09858.5prime
CAGTTCGACATGTCAACCGACGCCGACCTAAACAAGTGCGTCAGTCCCAT
GTACCAGGTGTCAACCGCAGGCGACGGCCTCCAAGCAGAAGCCGCTGGAG
ATCTGGCGTTGGCCTCCATTGTCGCAGCTCCCTCCTATTCCTGCGAGCCA
CAGAAGGACTCCACCGACATGGACGTGGACATGGAGATAGACAACGATCT
TACCACTAGCGAACGGATGCCAACGGTGGCCGAGCTGGAGCAGCCGATGG
ATTCCAAAACGAAACGGGAGAAAAAAGAGGAGGAGGAGCAGAAGGACGCG
CAGGACCAGAAGCCACTGGAGGACGGCTCCGTGCAACCGCCCAGCAATCC
GACAGCCATCAAAATCGAGGAGGAGGACAAGCCAGTGAAGCCGCCGCCGC
AGCCGCAGGCTCAGGAGGAAGTCGCGCCCAGTTCGCCGGAGACAGCAGCG
AATCCCAGCCAGAGAACTGCGGGCAAGATCACCCGTAGCAGTCTAAATGG
CACAGCCAACCAGGCGCCCACCCGCTCCCCAACGATAATAAAGCGTCTGC
GAAAGAGCACGCGCTTCAAGGCCAAGCAAACGGGCAAGGGCACTCCCGGA
AGCGGCAGTAGCCAGTCAAATGGCCACAATAGCGGGGCGAATGGTTCCAC
CGGCAGCTCCGTGCACCTCGCGGGCGCTGGCGCCCATCCCAGTAATACCA
ACAAGCATGGGAAGTCCGGTCCAGCGGGCACAGGCGGGGCCACTGGAGCC
CGTAATCGCCGCGCTCTCTTCAAGAAACCCAGCACACAAAACTCCCAAGG
TGCACGCGAGCACCAGGTTCGTGAGAAGCCTTTTCACAAGGGCAGCTACT
ACAAATCGGGGATATCGTCAGCATTGTGGACAGCGAGCAGAATCTGTACT
ACGCCCATGTACGCCGTGCTGCTTGTGGACGCTATTGCGAAGAAGTCCGG
CTTTCCTCACCTGGCCTGATTTCCCAGGCAGGACAGTTCCGGATCCCAGG
AGGGCTTCGAATCCCCCTACCTACCTAATCGGACTCCGATGAAGGACTGT
TCCCGGAAGGCTCTTGCTACCTTAAAAGTTCGTGGATGCATTGCTTCCCA
AACAAACT
FMO09858.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:06:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13367-RA | 1550 | CG13367-RA | 135..1206 | 9..1091 | 4790 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:06:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 644895..645914 | 9..1032 | 4440 | 97.8 | Plus |
| X | 23542271 | X | 644361..644585 | 9..233 | 1125 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:06:24 has no hits.
FMO09858.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:45 Download gff for
FMO09858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13367-RA | 128..1200 | 1..1084 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:00 Download gff for
FMO09858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13367-RA | 128..1200 | 1..1084 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:20 Download gff for
FMO09858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13367-RA | 128..1200 | 1..1084 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:20 Download gff for
FMO09858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 644888..645914 | 1..1032 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:00 Download gff for
FMO09858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 538921..539947 | 1..1032 | 97 | | Plus |
