Clone FMO09859 Report

Search the DGRC for FMO09859

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:98
Well:59
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14324-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09859.5prime Sequence

419 bp (419 high quality bases) assembled on 2010-10-27

> FMO09859.5prime
CAGTCGACATGAGGCAAAACAAGATAACGATTTTGGGTCTGTCCCTGCTG
CTTTGTTTGGCGCTTGCACACTCACATGGTTTTGGTGGAAAGCTTGGAGG
AGGCTACGCCCCTGTCTACAACAACTTTGTCCCATATCCAGTTGCCCAAC
CGATCCCAGTGGCCCAACCTGTTCCAGTTCCCGTGGCTATTCCTCAACCA
ATTCCAGTCCCAGTCCCCCAACCAGTAGTTATTCCCATCAAACACGGATG
GAAGGGTGGTCTAGGTCTAGGTGGATTTGGCGGAGGTTATGGCGGCGGTT
TCGGAGGCTACCAGAACTTTGCCTCTGCCTCCTCTTTTAGCTCTGCCAGT
TCATTTGGCGGTGGCTATGGCGGATTGGGTGGTGGCACCTTTAGGCGGCG
CGCAAGCTTTCTAGACCAT

FMO09859.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14324-RA 464 CG14324-RA 23..417 7..401 1975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17618328..17618707 401..22 1900 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:06:28 has no hits.

FMO09859.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:45 Download gff for FMO09859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14324-RA 9..409 1..401 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:02 Download gff for FMO09859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14324-RA 17..417 1..401 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:22 Download gff for FMO09859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14324-RA 17..417 1..401 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:22 Download gff for FMO09859.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17618328..17618705 24..401 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:02 Download gff for FMO09859.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13444050..13444427 24..401 100 <- Minus