FMO09863.5prime Sequence
344 bp (151 high quality bases) assembled on 2010-10-27
> FMO09863.5prime
CAATCCACATGTCGTATCAACTGTACCGCAACACCACGCTCGGCAACACC
CTGCAGGAGAGCCTCGACGAGCTGATTCAGTACGGCCAGATTACGCCCGG
ACTGGCTTTCAAGGTTCTGCTGCAATTCGACAAGAGCATCAACAATGCCC
TAAACCAGCGGGTCAAGGCCCGCGTCACCTTCAAGGCTGGAAAACTAAAC
ACCTACCGCTTCTGCGACAATGTCTGGACTCTCATGCTTAACGATGTGGA
GTTCCGCGAAGTGCACGAGATCGTCAAGGTGGACAAGGTGAAGATCGTGG
CCTGCGACGGCAAGAGCGGCGAGTTCGCAAGCTTTCTAGACCAT
FMO09863.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIA-S-RA | 617 | CG5163-RA | 106..423 | 9..326 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23890582..23890830 | 326..78 | 1245 | 100 | Minus |
| 3R | 32079331 | 3R | 23890884..23890955 | 80..9 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:08:10 has no hits.
FMO09863.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:01 Download gff for
FMO09863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIA-S-RA | 94..423 | 1..330 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:50 Download gff for
FMO09863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIA-S-RA | 98..427 | 1..330 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:03 Download gff for
FMO09863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIA-S-RA | 98..427 | 1..330 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:03 Download gff for
FMO09863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23890578..23890827 | 81..330 | 99 | <- | Minus |
| 3R | 23890884..23890963 | 1..80 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:50 Download gff for
FMO09863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19716300..19716549 | 81..330 | 99 | <- | Minus |
| arm_3R | 19716606..19716685 | 1..80 | 96 | | Minus |
