Clone FMO09866 Report

Search the DGRC for FMO09866

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:98
Well:66
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14856-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09866.5prime Sequence

1133 bp (994 high quality bases) assembled on 2010-10-27

> FMO09866.5prime
CAGTCGACATGGCCATGGACTTTGACGAGATACTGGTCAAATGCGGCGAC
TCCCATCGCTACCAGTACATGCTATTGGCTCTCTACGGACTATTGATGTT
CATTGTTTCCCGGCACTACTTCGCCCAAAACGTTATTGGATTTGTGCCCG
ATCATTGGTGCTATCACGAACAGCTGGAGAATCGTAGCTATGCCGAAATA
GCTGCGATATACGCCCCATTCAAGAGGCCTTCGTGCACGCGACTGGCATC
GATCAACATGGATGGGAGCAATGCCACGGCCAGCAGTGAGCCCTGCAATC
GATGGATTTACCACTATGACCATGGATTCATAAGCATGAACGCTGATCTG
AATTGGGTTTGTGATGATGCGTACAAGGCTCGAGTGGGTCAGTCCCTGTT
CTTTGTGGGCTCCATGTGTGGCACCCTGTTGTTTGGTCTACTTGGCGATC
GAATCGGACGCATCAAGGCTGTAGTTTTGGCCAATTGCTGTGGCTTCCTG
GGCGACTCGGCTACCATTTTTGCAGAGACCCTGTTGACTTTCTCGGCCAG
CCGATTTGTATCTGGACTGGCTGCAGAGGCAAACTCCTACCTCATGTTTA
TTTTGGTCTTGGAGTACGTGTCTCCGACGATGCGAAGTGTGGGCTTGAAC
TTGACAATGTGTGTTTTTTACGGCCTGGGAATGATATGTGCATCTTGGCA
GGGCGTCTGGTTGGGTAGTTGGCGTTCCTTCATGGTCTGGACCGCCCTGC
CCCAGCTGTTGGTCACCGGGTTCTACTTTCTGATTCACGAGAGCGCACAG
TGGCTGGTCACGCGCCAAGACTTCGATGGAGCTGAGTTGAGGCTACGCCG
TGTGGCCCAGTTCAATCGGCGCGATGTCAGCGAGCGGACTATGAGCTATT
CCGTCAGCATTGCAAGACGATGGAGTCGGAGGCAGAAGCCAGATGTCCAT
GCAGAAGCAGCACGTCTCATTGACTCATTCAACCTGCCACGCCTGCGTTC
CGCTGATCTATGTAACGGTTGTCTTCTCGATAGTGACGCTTTGTACAACA
CAATGTCTCGTATGGTGAAGGTTGAACCTATCACCGATCGTCATGTCAGC
CTTTCGCCCTGAACTGCACATCAGCATCTTCGA

FMO09866.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14856-RA 1999 CG14856-RA 84..1200 6..1112 5185 98.2 Plus
CG14855-RA 1973 CG14855-RA 246..829 14..597 685 74.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14799789..14800213 606..1025 1815 97.9 Plus
3R 32079331 3R 14799069..14799410 6..347 1710 100 Plus
3R 32079331 3R 14799475..14799733 348..606 1295 100 Plus
3R 32079331 3R 14796958..14797201 354..597 395 77.5 Plus
3R 32079331 3R 14796649..14796843 113..307 300 76.9 Plus
Blast to na_te.dros performed on 2014-11-26 15:08:22 has no hits.

FMO09866.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:03 Download gff for FMO09866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14856-RA 75..1157 1..1075 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:56 Download gff for FMO09866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14856-RA 79..1161 1..1075 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:09 Download gff for FMO09866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14856-RA 79..1161 1..1075 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:09 Download gff for FMO09866.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 14799064..14799410 1..347 99 -> Plus
3R 14799475..14799733 348..606 100 -> Plus
3R 14799790..14800213 607..1025 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:56 Download gff for FMO09866.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10624786..10625132 1..347 99 -> Plus
arm_3R 10625197..10625455 348..606 100 -> Plus
arm_3R 10625512..10625935 607..1025 97 -> Plus