FMO09868.5prime Sequence
1009 bp (999 high quality bases) assembled on 2010-10-27
> FMO09868.5prime
CAGTCGACATGTCGCAGGTATCAACCCTCATCGATGTGGACAAGCCACTC
TTCGATCTCAGCACCTTCGCTGGGCGCTTCCAGTACTTCGCCTGGATGAC
GGACCCCCGCACCGTAGTCGTATCCAGCGATCGCCTGCTGGAAGCCAAAG
CAATGGTTGAACGCTACCGGAAAGGTGACCAATCCCCGCCGCTGAAGCCG
GAGGAGGTGCACTACAACATGAAGCTGTACAACTCAGCCTTTCATCCGGA
TACCGGCGAGCTGCAGAACTTTTGCGGCCGCATGAGTTTTCAGGTACCCG
GAGGCATGTTGATCACCGGTGGCATGCTGGCCTTCTATCGCACCGTGCCC
GCCGTGGTGCTCTGGCAGTTCATCAACCAGTCCTTCAATGCGGTTGTTAA
CTACACGAATCGCAATGCCAACTCGCCAACTAGCGTTACGCAGCTGGGCG
TGGCCTATGTATCCGCCACGACATCGGCTCTGGTAGCTGCTATTGGATGC
AAGAACTATTGGTCAAAGAAAGCGACTCCGCTGTTCCAAAGATTTGTGCC
CTTCGCAGCTGTGGCGGCAGCCAACTTCGTGAACATTCCGCTGATGCGAC
AAAATGAGATAATCAATGGCATAGAGGTGAAGAACGACGATGGAGTGGTT
GTGGGCCAGAGTAGATTGGCAGCCATCAAAGGAATCGGTGAGGTGGTTGT
GTCCAGGATTGCGATGGCGGCGCCCGGAATGCTGGTGCTGCCATTGATAA
TGGAGAGGCTGGAGACACTGCCTGCCTACAGGCGCATCAAGTGGATTAAT
GCTCCATTCCAGACCCTTTTGGTTGGGTGCTTCCTTTGCTTCATGGTGCC
CACTGCCTGCGCCCTGTTCCCACAGCAGTGTTCCTTGGACACTTCGATTA
TGCGCACCTTCGAGCCCGAACTTTACGAGGACCTCGAGAAGAAAACTCAC
GGCGAAGTGCCCAGCGTGTCTACTTCAACAAGGGTCTTGGCCAGCTTTCT
AGAACATTT
FMO09868.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6812-RA | 2062 | CG6812-RA | 537..1516 | 9..987 | 4830 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19064840..19065383 | 289..832 | 2705 | 99.8 | Plus |
| 3L | 28110227 | 3L | 19064327..19064596 | 25..294 | 1350 | 100 | Plus |
| 3L | 28110227 | 3L | 19065450..19065605 | 833..987 | 700 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:08:31 has no hits.
FMO09868.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:04 Download gff for
FMO09868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6812-RA | 522..1514 | 1..994 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:53:59 Download gff for
FMO09868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6812-RA | 529..1521 | 1..994 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:12 Download gff for
FMO09868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6812-RA | 529..1521 | 1..994 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:12 Download gff for
FMO09868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19064327..19064595 | 25..293 | 100 | -> | Plus |
| 3L | 19064845..19065383 | 294..832 | 99 | -> | Plus |
| 3L | 19065450..19065610 | 833..994 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:53:59 Download gff for
FMO09868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19057427..19057695 | 25..293 | 100 | -> | Plus |
| arm_3L | 19057945..19058483 | 294..832 | 99 | -> | Plus |
| arm_3L | 19058550..19058710 | 833..994 | 95 | | Plus |
