FMO09878.5prime Sequence
395 bp (395 high quality bases) assembled on 2010-10-27
> FMO09878.5prime
CAGTCGACATGGTGAAGGTTAAGTGCTCCGAGCTGAGGATCAAGGACAAG
AAGGAACTCACCAAGCAATTGGATGAGCTCAAGAATGAGTTGCTCAGCCT
GCGCGTGGCCAAGGTGACCGGCGGAGCTCCCTCCAAGCTCTCCAAGATCC
GCGTTGTCCGCAAGGCCATCGCTCGCGTCTACATTGTGATGCACCAGAAG
CAGAAGGAGAATCTGCGCAAGGTCTTCAAGAACAAGAAGTACAAGCCCCT
GGATCTGCGCAAGAAGAAGACCCGCGCTATCCGCAAGGCCCTGTCTCCGC
GCGACGCCAACCGCAAGACCCTCAAGGAGATCCGCAAGCGCTCCGTCTTC
CCCCAGAGGAAGTTCGCCGTCAAGGCCGCAAGCTTTCTAGACCAT
FMO09878.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL35-RC | 590 | CG4111-RC | 120..488 | 9..377 | 1845 | 100 | Plus |
| RpL35-RA | 606 | CG4111-RA | 140..508 | 9..377 | 1845 | 100 | Plus |
| RpL35-RB | 507 | CG4111-RB | 41..409 | 9..377 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5673217..5673445 | 149..377 | 1145 | 100 | Plus |
| X | 23542271 | X | 5672997..5673134 | 11..148 | 690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:08:58 has no hits.
FMO09878.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:08 Download gff for
FMO09878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL35-RA | 210..584 | 2..377 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:54:12 Download gff for
FMO09878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL35-RB | 35..409 | 2..377 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:26 Download gff for
FMO09878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL35-RB | 35..409 | 2..377 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:26 Download gff for
FMO09878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5672990..5673134 | 1..148 | 97 | -> | Plus |
| X | 5673217..5673445 | 149..377 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:54:12 Download gff for
FMO09878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5567023..5567167 | 1..148 | 97 | -> | Plus |
| arm_X | 5567250..5567478 | 149..377 | 100 | | Plus |
