FMO09879.5prime Sequence
1008 bp (1002 high quality bases) assembled on 2010-10-27
> FMO09879.5prime
CAGTCGACATGTCCAAGGATCACTGGATGAGGGATCTGCCAAGCGAGTTG
CGTGACCTGTCGATAATCAATCTGGCTATTCCAGGTTCCCACAATTCGAT
GACTTATGGCATAAATAGCAAGTCCGAACTATCGCCAGATGCGGAAATTT
CGATTAGGCGGTGGCATCGCTTCTTTCCCTGCTTCGTGCGCCGTTGGAGC
AAGACGCAATCTTCTGGAACACTGGATCAACTGGAGCTGGGAGTGCGGTA
CTTTGACCTAAGGATAGCCCAGAAGGATGATAAGTTCTACTACTGTCATG
GCCTTTTTGCCATGGAGATTTTTGAGCCACTTCTGGAGATTCGCCAGTTC
GTGGACACCCATCCAGAGGAGGTGGTAATCCTGGATCTGCAGCACTTTTA
CGCCATGACAGTGGCTCATCACCAGAAGCTGCACAAGGATCTGATCCAGT
TCTTCGCCCATCGTCTGTACTCCACAGTGGATGGTTCACTCAAGGATTGT
ACTCTGAATAGATGCTTGGAAATGCAGCGCAGCGTGGTGATCATCTACAG
GCGATGTCCCATTCCACTGCCGCTGAGATTCTGGCCCAGTTATGCGTGGC
CCACACCGTGGCCCAATAAAGCGAGTGTCAAGAAGCTGCAGTCCTTTCTG
GAGGATTCCCTACTCTCGCGACAGCCCCAACAGGGTTATGTCTCCCAGTG
CCTTATCACGCCCACTGGTCGCTATATCGCCTTCCGGCTCTTCTTCACCC
TGAAGAGCACAGCCAAACGGGTGGACAAGAAGCTGCAGCCTTGGATTCAG
GAACAGATTCCAGGTCCCTTCGAGCCAAAGGACGAGCCAAGGGTAAACGT
GTTCCTGGCCGACTTCGTAAGCCTAAAGGGCGGACAGTTCTGCGATTGGG
TAGTTGATCTGAACACAAAACTACTTGAGCAATTGCTGGCGATAAGAGCC
TGGAGTCCACTGAAGCGTTGGAAAAGAAGGAGCCCACGGTGCAGCTTTCT
AGACCATC
FMO09879.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:09:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10747-RB | 1600 | CG10747-RB | 220..1204 | 8..990 | 4740 | 99.1 | Plus |
| CG10747-RA | 1529 | CG10747-RA | 149..1133 | 8..990 | 4740 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:09:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20090041..20090941 | 982..83 | 4335 | 99 | Minus |
| 2L | 23513712 | 2L | 20090996..20091074 | 86..8 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:09:02 has no hits.
FMO09879.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:09 Download gff for
FMO09879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10747-RA | 140..1127 | 1..986 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:54:13 Download gff for
FMO09879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10747-RA | 142..1129 | 1..986 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:28 Download gff for
FMO09879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10747-RA | 142..1129 | 1..986 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:28 Download gff for
FMO09879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20090036..20090939 | 85..986 | 99 | <- | Minus |
| 2L | 20090998..20091077 | 1..84 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:54:13 Download gff for
FMO09879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20090036..20090939 | 85..986 | 99 | <- | Minus |
| arm_2L | 20090998..20091077 | 1..84 | 95 | | Minus |
