FMO09887.5prime Sequence
1151 bp (1039 high quality bases) assembled on 2010-10-27
> FMO09887.5prime
CAGTCGACATGATAGCAGAATTCCCACGGCCGACGACGAATGTGAATTGG
GAAAATCGAAAAAGCAGGCAAAGCCAGGAGGCGGATAAATCGCCGAGCGA
GTGCAGCAAATCGATCAGCTGTGACGTCGACGGGGGCAGAAAGTTTGGCC
AAAAGAAAAGGTCAAACAAGCAGCAGCAGCAACAACAACAACAACTGCAC
GCGGAACGGAAAGAGGAGGAGCTCTGTCACAAGCAAGGGGTAAAGGATAA
GAGTAGTAAGAAGAAGGAGAATCTAGCAGGCGAGGAGGATAAGAAGAAAA
AGCAAGAGGAAAGGGAACATAGCAAGAAGAAGCAGCAGCTTCAGCAGAAG
CAAAGGGCAAATAACAAGAAGAAGAAGCGGCATCAGCCTCCCCGTGTACA
GAGGAAAAAAAACCTCGTCTTATTTTTAGATTATTTACGCCAGTTTGGTG
CCGTCGAAAGCGAAATTGTCGCTGTTGAATCAGCCGGCTGCTGTGACGTC
AGAGAAGCAGGCTGCCATCACGCCAACGGTAAATACGCCGCCCATAACGG
CACTTGGAGCCATTTCGAGCATAAAACCGAAATTTATGCTCTATATCGTC
ACCTGGAGATCGGTGGCCCGCTCGAACAAGTGCAACAGCAACAGCAGCTG
AGGGTCTGTCCAATCAAGACCCGGCTGCGCTTCGAGATGCTCTTTGCCGA
GCCACCGCCCACCCAGGGCCACGCCCCCACCGCCCACGGTCACGATCATA
CGGCCGATGATATGCCAGATGCGCCACCTGGTGGCGAGCCGGTGATCCCA
ATGCTGCAGGATCAGCAAAACAGCGAACTTATGGCCGGCACCGCCAGCAA
CGTCGAGCTAATGGAGGCCATGAAGAAATTGGACGCGGACCTGGTGGCCC
TTTTCGCCACTGCTGCCTCCGCCGAACCTCTTAGATTAGGAAACAGCAGG
AGGTCCTGTGCCGGGAGCCGAGCCGGAGCAAACCGCCCAGGAATCGAGAT
GATGAGCTGGTGATGACGCCGGAGCTCTTCCGCAGCTGCACGCTTGCAGC
TGCACTTGGAGGCACTGACTGGCAGCGGAGGACCCACGCATGAACTGATC
GACGAGTGCGACCATTTCCACTGGAGCACGTCCGGGAACTGATCGTAAGT
G
FMO09887.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:09:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32425-RF | 2171 | CG32425-RF | 314..1414 | 9..1097 | 5185 | 98.7 | Plus |
| CG32425-RB | 1090 | CG32425-RB | 58..333 | 834..1097 | 1060 | 94.9 | Plus |
| CG32425-RA | 2813 | CG32425-RA | 90..361 | 838..1097 | 1055 | 95.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:09:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20497636..20498465 | 9..838 | 4135 | 99.9 | Plus |
| 3L | 28110227 | 3L | 20510029..20510267 | 837..1069 | 920 | 96.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:09:17 has no hits.
FMO09887.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:11 Download gff for
FMO09887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RF | 232..1319 | 9..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:54:21 Download gff for
FMO09887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RF | 314..1401 | 9..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:36 Download gff for
FMO09887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RF | 314..1401 | 9..1086 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:36 Download gff for
FMO09887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20497636..20498464 | 9..837 | 99 | -> | Plus |
| 3L | 20510030..20510288 | 838..1086 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:54:21 Download gff for
FMO09887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20490736..20491564 | 9..837 | 99 | -> | Plus |
| arm_3L | 20503130..20503388 | 838..1086 | 95 | | Plus |
